Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30766
         (829 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118688-1|AAM50548.1|  709|Drosophila melanogaster AT15442p pro...    33   0.63 
AE014298-3210|AAF50936.1|  709|Drosophila melanogaster CG12446-P...    33   0.63 

>AY118688-1|AAM50548.1|  709|Drosophila melanogaster AT15442p
           protein.
          Length = 709

 Score = 32.7 bits (71), Expect = 0.63
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 497 VCVQLTIPINYSRISTTARPLINYSYSISKISDIRMCCACAPPNVILTDSWQL 655
           VCV +T+P     +    +PL+  SY  S    +R  C   P   +    W+L
Sbjct: 5   VCVMVTVPTEAEELKLCPKPLVGASYCSSCGGCVRSRCTEEPSGEVCERCWRL 57


>AE014298-3210|AAF50936.1|  709|Drosophila melanogaster CG12446-PA
           protein.
          Length = 709

 Score = 32.7 bits (71), Expect = 0.63
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 497 VCVQLTIPINYSRISTTARPLINYSYSISKISDIRMCCACAPPNVILTDSWQL 655
           VCV +T+P     +    +PL+  SY  S    +R  C   P   +    W+L
Sbjct: 5   VCVMVTVPTEAEELKLCPKPLVGASYCSSCGGCVRSRCTEEPSGEVCERCWRL 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,379,528
Number of Sequences: 53049
Number of extensions: 588179
Number of successful extensions: 925
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)