Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30765
(464 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 94 6e-20
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 81 4e-16
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 81 6e-16
07_01_1001 - 8460467-8460799 68 3e-12
07_03_0321 + 16757414-16757743 65 2e-11
01_06_0098 - 26416768-26416998 31 0.35
08_02_1093 - 24271826-24273427 30 1.1
12_02_1217 + 27082452-27083593,27085041-27085158 29 1.4
11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877 29 1.8
12_01_0140 - 1088400-1088843 29 2.4
12_01_0090 + 717524-719080 28 4.3
10_08_0104 + 14824122-14824178,14824274-14824318,14824419-148245... 28 4.3
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 4.3
12_01_0141 - 1091579-1091983 27 5.6
06_01_0336 + 2427017-2427121,2427585-2427662,2427889-2427960,242... 27 5.6
05_01_0120 - 828834-831143 27 5.6
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 27 5.6
01_07_0135 + 41342118-41342181,41342326-41343260 27 5.6
01_01_1235 - 10017728-10017766,10018891-10019352 27 5.6
01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152 27 5.6
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349... 27 7.4
04_04_1658 - 35119623-35119754,35121033-35121121,35121205-351215... 27 7.4
01_06_0683 - 31173763-31174635,31175146-31175436 27 7.4
11_06_0264 - 21785450-21786928 27 9.8
06_03_0854 + 25400855-25403741,25406174-25407708 27 9.8
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 93.9 bits (223), Expect = 6e-20
Identities = 42/74 (56%), Positives = 60/74 (81%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 213
M+ +AAYLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGRE
Sbjct: 1 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60
Query: 214 KLSSMPVGGGAPAA 255
K +S+P GGG A
Sbjct: 61 KFASVPSGGGGGIA 74
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 81.0 bits (191), Expect = 4e-16
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = +1
Query: 31 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 210
+M++++AYLLA L G P+A D+ IL SVG E D K++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252
Query: 211 EKLSSMPVGGGAPA 252
EK +S+P GGG A
Sbjct: 253 EKFASVPCGGGGVA 266
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 80.6 bits (190), Expect = 6e-16
Identities = 34/73 (46%), Positives = 54/73 (73%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 213
M++++AYL+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LIA GRE
Sbjct: 1 MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60
Query: 214 KLSSMPVGGGAPA 252
K +S+P GGG A
Sbjct: 61 KFASVPSGGGGVA 73
>07_01_1001 - 8460467-8460799
Length = 110
Score = 68.1 bits (159), Expect = 3e-12
Identities = 34/74 (45%), Positives = 49/74 (66%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 213
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60
Query: 214 KLSSMPVGGGAPAA 255
L+ V G APAA
Sbjct: 61 MLAFGGV-GAAPAA 73
>07_03_0321 + 16757414-16757743
Length = 109
Score = 65.3 bits (152), Expect = 2e-11
Identities = 33/74 (44%), Positives = 48/74 (64%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 213
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60
Query: 214 KLSSMPVGGGAPAA 255
L+ G APAA
Sbjct: 61 MLAF----GAAPAA 70
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.5 bits (68), Expect = 0.35
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 85 PAAADVEKILSSVGIEADGEKLKKVITELNGKD 183
P V KI+ +V IEAD + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>08_02_1093 - 24271826-24273427
Length = 533
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 31 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 210
+ R AA +AV G+TT AAA + SS G + ++ + L +D +A R
Sbjct: 3 RKREAAAAAVAVADGETTTAAARADSSSSSEGGSVCDDVVRNIFARLPARDAVASMALSR 62
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 52 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKL 150
Y+LA+ TPA +D E+ VG +ADG+ L
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59
>11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877
Length = 258
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 76 KTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIA 201
KTT E +L+ + DG+K KKV+ L ++VE+L++
Sbjct: 137 KTTTEDDHEEVLLAYRSRKEDGKKRKKVVRRLGKEEVERLLS 178
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 136 DGEKLKKVITELNGKDVEQLIA 201
DG+K+KKV+ L ++VE+L++
Sbjct: 36 DGKKMKKVVKRLGKEEVERLLS 57
>12_01_0140 - 1088400-1088843
Length = 147
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 76 KTTPAAADVEKILSSVGI--EADGEKLKKVITELNGKDVEQLIA 201
KTT D E++L + + DG+K KKV+ L ++VE+L++
Sbjct: 25 KTTTTEDDHEEVLLAYRPREKEDGKKRKKVVRRLGKEEVERLLS 68
>12_01_0090 + 717524-719080
Length = 518
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 239 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIF 105
PP + S P ++ S+S SS + + + S S+PT L F
Sbjct: 60 PPAVLSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTF 104
>10_08_0104 +
14824122-14824178,14824274-14824318,14824419-14824536,
14825522-14825581,14825783-14825891,14825972-14826197,
14826274-14826390,14826510-14826611
Length = 277
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 61 AVLGGKTTPAAADVEKILSSVGIEADGEKLK 153
A+L GK TP D+E+ L + G GE++K
Sbjct: 14 ALLRGKETPVILDLEESLRAKGDMTQGEEVK 44
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 143 SPSASIPTELRIFSTSAAAGVVLPPSTASKYAA 45
+P+ IPT F T A V +PP+TA AA
Sbjct: 533 APAPPIPTPSMPFPTVPAPPVTVPPATAPSMAA 565
>12_01_0141 - 1091579-1091983
Length = 134
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 130 EADGEKLKKVITELNGKDVEQLIA 201
E DG+K KKV+ L ++VE+L++
Sbjct: 30 EEDGKKRKKVVRRLGKEEVERLLS 53
>06_01_0336 +
2427017-2427121,2427585-2427662,2427889-2427960,
2428105-2428671,2428822-2428935,2431308-2432246
Length = 624
Score = 27.5 bits (58), Expect = 5.6
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = -1
Query: 254 AAGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVL 75
A+ PP G F AA + TS P IT SP+A+ + FS S
Sbjct: 378 ASSKPPLIGGRPFFLPTAAAAAITSTPSYPTITLDLTSPAAAATSSHAAFSLSNRFSHTR 437
Query: 74 PPSTASKYAAT 42
PST ++ +
Sbjct: 438 YPSTGFTFSGS 448
>05_01_0120 - 828834-831143
Length = 769
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -1
Query: 215 FSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAS 57
F P+++S +S+ S SPS S PT L + S+ L PS+ S
Sbjct: 503 FLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASSNFSHTLVPSSRS 555
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 27.5 bits (58), Expect = 5.6
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -1
Query: 254 AAGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIF---STSAAAG 84
AA A PP S RP+ S S+S T S S + PT ST+ ++G
Sbjct: 30 AAAAHPPPARTSSGGRPSTPSSSSSAAGGGRPTTPSSSSAGGRPTTPSAAFARSTTPSSG 89
Query: 83 VVLPPSTASKYAA 45
PS+AS AA
Sbjct: 90 RPTTPSSASSRAA 102
>01_07_0135 + 41342118-41342181,41342326-41343260
Length = 332
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 GKTTPAAADVEKILSSVGIEADGEKLKK--VITELNGKDVEQLIAAGREKLSSMPVGGGA 246
G PAA+DV K+ S GI++ + ++ L G ++ + E L++ A
Sbjct: 34 GNNLPAASDVVKLYKSKGIDSMRIYFPRSDILQALTGSNIALTMDVANENLAAFAADATA 93
Query: 247 PAA 255
AA
Sbjct: 94 AAA 96
>01_01_1235 - 10017728-10017766,10018891-10019352
Length = 166
Score = 27.5 bits (58), Expect = 5.6
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = -1
Query: 254 AAGAPPPTGIDDSFSRPAA--ISCSTSLPLSSVITFLSFSPSA-----SIPTELRIFSTS 96
AAG G+DD A +CS+ L ++ L F A +P L+ S S
Sbjct: 54 AAGGKQQGGVDDGEDGGGAGVRACSSDLSAAAFADEL-FREGALLRPLKLPPRLQTPSAS 112
Query: 95 AAAGVVLPPSTASKYAAT*R 36
AAA P+ ASK A++ R
Sbjct: 113 AAASAATSPTAASKAASSSR 132
>01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152
Length = 205
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -1
Query: 152 LSFSPSASIPTELRI--FSTSAAAGVVLPPSTAS 57
LS+SPSAS T+L I + + A V PPS++S
Sbjct: 114 LSYSPSASSITDLPIAPYPLNYAVAPVAPPSSSS 147
>07_01_0461 +
3492302-3492413,3492868-3492964,3493053-3493131,
3493484-3493794,3494219-3494231
Length = 203
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 242 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIP 123
PPP PAA+ S S+P S+V+ ++ PSA +P
Sbjct: 122 PPPEPTPTPAPAPAAVPPSASVP-STVVPPVAAPPSALLP 160
>04_04_1658 - 35119623-35119754,35121033-35121121,35121205-35121599,
35122009-35122091,35122163-35124184,35124859-35124927,
35125050-35125130,35125215-35125308,35125435-35125499,
35125961-35126038,35126115-35126360
Length = 1117
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/70 (22%), Positives = 27/70 (38%)
Frame = -1
Query: 254 AAGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVL 75
A GAPPP ++ + +C +P S+V + P + + T I + +
Sbjct: 998 AKGAPPPPAAPNAAAAGGFPACLRLMPPSTVAISIQAKPGSKLATITEIGDEAVGVQIDA 1057
Query: 74 PPSTASKYAA 45
P AA
Sbjct: 1058 PARDGEANAA 1067
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 27.1 bits (57), Expect = 7.4
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -1
Query: 236 PTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAG------VVL 75
P+G + S P+A + + S S + F P A +P + R + AA G +VL
Sbjct: 133 PSGGFSTASVPSAQAQAASAAASMAVQPGGFLPEAPVPAKARSKRSRAAPGNWSSRLLVL 192
Query: 74 PPSTAS 57
PP AS
Sbjct: 193 PPPPAS 198
>11_06_0264 - 21785450-21786928
Length = 492
Score = 26.6 bits (56), Expect = 9.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 242 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTE 117
PPP + + S AIS + V FL S +A IPTE
Sbjct: 384 PPPPPLATAASTATAISVAGLGGCGDVALFLGKSSAACIPTE 425
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 242 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPP 69
PPP I + A +S P+S+V + L+ S SA+ F+ + A +PP
Sbjct: 1120 PPPAPIPAATPAKALVSAPAPAPISTVSSTLAASASAA-----AAFAPAPVAAEAIPP 1172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,218,945
Number of Sequences: 37544
Number of extensions: 162588
Number of successful extensions: 629
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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