Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30765
(464 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 81 3e-16
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 81 4e-16
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 32 0.23
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 31 0.31
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 30 0.94
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 27 6.6
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 27 6.6
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 6.6
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal acet... 27 8.8
AF099927-2|AAZ32796.1| 116|Caenorhabditis elegans Hypothetical ... 27 8.8
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 27 8.8
AF025378-1|AAC14016.2| 629|Caenorhabditis elegans acetylcholine... 27 8.8
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 81.4 bits (192), Expect = 3e-16
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 213
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 214 KLSSMPVGGGAPAA 255
KLSS+P GG APAA
Sbjct: 61 KLSSVPSGGSAPAA 74
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 81.0 bits (191), Expect = 4e-16
Identities = 42/74 (56%), Positives = 52/74 (70%)
Frame = +1
Query: 34 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 213
MRYV+AYLLAVLGG P D++ ILS+VG++AD E K V++ L GK VE+LIA G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 214 KLSSMPVGGGAPAA 255
L S+ GG APAA
Sbjct: 61 GLVSVS-GGAAPAA 73
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 31.9 bits (69), Expect = 0.23
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 245 APPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 72
+P P SRP+AI +TS S + + PS S P+ L +F+ + GV LP
Sbjct: 339 SPSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 79 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 198
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 79 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 198
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 29.9 bits (64), Expect = 0.94
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Frame = -1
Query: 251 AGAPPPTGIDDSFSRPAAISCS-TSLPLSSVIT------FLSFSPSASIPTELRIFSTSA 93
+ AP + + + P+ + S +LP SV T L+ P +S PT + ST+
Sbjct: 2225 SSAPTSGAVSSTTNTPSPTNQSPVTLPPPSVATAGPTGPILTVVPVSSAPTSGAVSSTAT 2284
Query: 92 AAGVVLPPSTASKYAAT*RIF*VLI 18
AA V+ T+S + + +F VLI
Sbjct: 2285 AAPVITTTKTSSVLSVSFSMFIVLI 2309
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 27.1 bits (57), Expect = 6.6
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -1
Query: 242 PPPT--GIDDSFSRPAA---ISCSTSLPLSSVITFLSFSP---SASIPTELRIFSTSAAA 87
PPPT ++ + RP IS S P S + L+ +P S ++PT+ I +AAA
Sbjct: 300 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
Query: 86 GVVLPPSTAS 57
V ST +
Sbjct: 360 AVTSAMSTGN 369
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 27.1 bits (57), Expect = 6.6
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -1
Query: 242 PPPT--GIDDSFSRPAA---ISCSTSLPLSSVITFLSFSP---SASIPTELRIFSTSAAA 87
PPPT ++ + RP IS S P S + L+ +P S ++PT+ I +AAA
Sbjct: 302 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 361
Query: 86 GVVLPPSTAS 57
V ST +
Sbjct: 362 AVTSAMSTGN 371
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 27.1 bits (57), Expect = 6.6
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -1
Query: 242 PPPT--GIDDSFSRPAA---ISCSTSLPLSSVITFLSFSP---SASIPTELRIFSTSAAA 87
PPPT ++ + RP IS S P S + L+ +P S ++PT+ I +AAA
Sbjct: 300 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
Query: 86 GVVLPPSTAS 57
V ST +
Sbjct: 360 AVTSAMSTGN 369
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 103 EKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 243
EK +EAD + ++I + + VE L+ A +E+ VGGG
Sbjct: 101 EKTTFQCEMEADNSGVTEMIEKRYTQHVESLLTARKERKRRHRVGGG 147
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 194 SCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASKYA 48
S ST P+S+ + + + SIP+ S+ + + PPS+ASK A
Sbjct: 436 SISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPA 484
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 5 HVSCQLGLKKCVTWPRIYWLC 67
H CQ G +CV PR W C
Sbjct: 55 HFKCQTGQNQCVPDPRGRWNC 75
>AF106589-1|AAC78228.2| 629|Caenorhabditis elegans Abnormal
acetylcholinesterase protein2 protein.
Length = 629
Score = 26.6 bits (56), Expect = 8.8
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -1
Query: 251 AGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 72
A A PPT +D SF ++CS S +++++ L S+P L +G + P
Sbjct: 265 ASATPPTMLDLSFRLAKKVNCS-SPDMNAIVKCL-----RSVPAHLVQAEADNISGDIGP 318
Query: 71 PST 63
P T
Sbjct: 319 PMT 321
>AF099927-2|AAZ32796.1| 116|Caenorhabditis elegans Hypothetical
protein T04C4.1c protein.
Length = 116
Score = 26.6 bits (56), Expect = 8.8
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = -1
Query: 254 AAGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVL 75
A+ P DSF AA S S S P FLS PS S+ + ++S++ V
Sbjct: 28 ASPTSPRPSSSDSFGPSAAPSTSLSPP------FLS--PSYSMDYIIEAMTSSSSTSPVP 79
Query: 74 PPSTASKYAA 45
PP +AS+ A
Sbjct: 80 PPVSASRPVA 89
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 26.6 bits (56), Expect = 8.8
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = -1
Query: 254 AAGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVL 75
A+ P DSF AA S S S P FLS PS S+ + ++S++ V
Sbjct: 28 ASPTSPRPSSSDSFGPSAAPSTSLSPP------FLS--PSYSMDYIIEAMTSSSSTSPVP 79
Query: 74 PPSTASKYAA 45
PP +AS+ A
Sbjct: 80 PPVSASRPVA 89
>AF025378-1|AAC14016.2| 629|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 629
Score = 26.6 bits (56), Expect = 8.8
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -1
Query: 251 AGAPPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 72
A A PPT +D SF ++CS S +++++ L S+P L +G + P
Sbjct: 265 ASATPPTMLDLSFRLAKKVNCS-SPDMNAIVKCL-----RSVPAHLVQAEADNISGDIGP 318
Query: 71 PST 63
P T
Sbjct: 319 PMT 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,097,463
Number of Sequences: 27780
Number of extensions: 122240
Number of successful extensions: 440
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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