Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30764
         (336 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   0.86 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   4.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   6.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   6.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   6.0  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 0.86
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -1

Query: 237 GGNTFLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDV 121
           G +T L   +CLLH +     L+ +    G L  + + V
Sbjct: 268 GVHTLLILFSCLLHLVVTPYYLLIEVCNAGYLPFILLQV 306


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 205 PPSLYCGGPQPGR 167
           P SLYCG P  G+
Sbjct: 356 PWSLYCGEPPCGQ 368


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 253 LRPSLEKTKPRLP 291
           L PSL  T+P LP
Sbjct: 25  LPPSLSDTRPMLP 37


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -1

Query: 225 FLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVL 97
           F      LLHF+   LSL  K     + +L  ++   E  +++
Sbjct: 174 FCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIV 216


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -1

Query: 225 FLAALACLLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVL 97
           F      LLHF+   LSL  K     + +L  ++   E  +++
Sbjct: 174 FCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKNIIV 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,053
Number of Sequences: 336
Number of extensions: 1035
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)