Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30763
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.8
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81063-6|CAB02957.2| 296|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 29 3.1
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 29 3.1
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 29 3.1
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 29 3.1
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 29 4.1
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p... 28 5.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 5.4
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ... 28 5.4
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ... 28 5.4
AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical ... 27 9.4
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/91 (29%), Positives = 38/91 (41%)
Frame = +1
Query: 1 NISSRSTSYKAADITSEDSSTAVPNAPKVLKSKEPIGDALQELASQLLEKTENTSEQVIA 180
+IS +S K AD S KSK+ D + LEK +T++Q+
Sbjct: 12879 SISQKSNVLKPADDDKSKSDDVTD------KSKKTTEDQTKVATDSKLEKAADTTKQIET 12932
Query: 181 ESRVSTKLKFPNQKHKTIQNEDDAFIMGMQE 273
E+ V K K K KT + D+FI E
Sbjct: 12933 ETVVDDKSKKKVLKKKT--EKSDSFISQKSE 12961
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/91 (29%), Positives = 38/91 (41%)
Frame = +1
Query: 1 NISSRSTSYKAADITSEDSSTAVPNAPKVLKSKEPIGDALQELASQLLEKTENTSEQVIA 180
+IS +S K AD S KSK+ D + LEK +T++Q+
Sbjct: 12879 SISQKSNVLKPADDDKSKSDDVTD------KSKKTTEDQTKVATDSKLEKAADTTKQIET 12932
Query: 181 ESRVSTKLKFPNQKHKTIQNEDDAFIMGMQE 273
E+ V K K K KT + D+FI E
Sbjct: 12933 ETVVDDKSKKKVLKKKT--EKSDSFISQKSE 12961
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 123 RTSQPTARENREHVRTSNR*KQSIHKTKVSKSETQNNTKRRRCFYNG-HAGEAVPITIED 299
+++ A + +E V + +++ K+ + + + K+R FY+ VP+ +ED
Sbjct: 414 KSASEAAHDTKEAVTSKAAEVENVVKSSLGQRAAALHEKKREFFYSTPEKTSTVPVFVED 473
Query: 300 LETENASDV 326
L + DV
Sbjct: 474 LNEQTLDDV 482
>Z81063-6|CAB02957.2| 296|Caenorhabditis elegans Hypothetical
protein F15D3.8 protein.
Length = 296
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 518 NKADLIAAGSAINENVYNKIQRHSPDECAKEQKC*LSKNYHYHNYSGSNRN 670
N+ ++ AI V N QR ++ EQ+ L K YH +G+NR+
Sbjct: 88 NEIEMEQLKLAIGNRVENHNQRKVEEQLRNEQERFLKKLLKYHTTTGANRD 138
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 123 RTSQPTARENREHVRTSNR*KQSIHKTKVSKSETQNNTKRRRCFYNG-HAGEAVPITIED 299
+++ A + +E V + +++ K+ + + + K+R FY+ VP+ +ED
Sbjct: 414 KSASEAAHDTKEAVTSKAAEVENVVKSSLGQRAAALHEKKREFFYSTPEKTSTVPVFVED 473
Query: 300 LETENASDV 326
L + DV
Sbjct: 474 LNEQTLDDV 482
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 470 TTFEQESG*TSNYASSNKADLIAAGSAINENVYNKIQRHSPDECAKEQKC*LSKNYHYHN 649
TT+ + NY+SS A S E+ +R++ + +Q+ S Y Y N
Sbjct: 373 TTYPTTKTTSYNYSSSTIPSQPAKPSFNQESYTTHTERNNSSQGFPQQRLQPSGGYSYEN 432
Query: 650 YSGSNRND 673
YS S + +
Sbjct: 433 YSSSRKEE 440
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 470 TTFEQESG*TSNYASSNKADLIAAGSAINENVYNKIQRHSPDECAKEQKC*LSKNYHYHN 649
TT+ + NY+SS A S E+ +R++ + +Q+ S Y Y N
Sbjct: 707 TTYPTTKTTSYNYSSSTIPSQPAKPSFNQESYTTHTERNNSSQGFPQQRLQPSGGYSYEN 766
Query: 650 YSGSNRND 673
YS S + +
Sbjct: 767 YSSSRKEE 774
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 470 TTFEQESG*TSNYASSNKADLIAAGSAINENVYNKIQRHSPDECAKEQKC*LSKNYHYHN 649
TT+ + NY+SS A S E+ +R++ + +Q+ S Y Y N
Sbjct: 957 TTYPTTKTTSYNYSSSTIPSQPAKPSFNQESYTTHTERNNSSQGFPQQRLQPSGGYSYEN 1016
Query: 650 YSGSNRND 673
YS S + +
Sbjct: 1017 YSSSRKEE 1024
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 151 TENTSEQVIAESRVSTKLKFPNQKHKTIQNEDDAFIMGMQERQFPSQSKILKLRMPVM*S 330
T++ ++ + R + L+F + +++Q++DD +G+QER QS ++
Sbjct: 309 TKSEADAFEEQMRKKSTLEFAAHEKRSLQSDDDEEFIGIQERD--RQSVVVPSHATSS-E 365
Query: 331 MTLLLPRKVY 360
+T L P VY
Sbjct: 366 ITGLFPNSVY 375
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 151 TENTSEQVIAESRVSTKLKFPNQKHKTIQNEDDAFIMGMQERQFPSQSKILKLRMPVM*S 330
T++ ++ + R + L+F + +++Q++DD +G+QER QS ++
Sbjct: 309 TKSEADAFEEQMRKKSTLEFAAHEKRSLQSDDDEEFIGIQERD--RQSVVVPSHATSS-E 365
Query: 331 MTLLLPRKVY 360
+T L P VY
Sbjct: 366 ITGLFPNSVY 375
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 151 TENTSEQVIAESRVSTKLKFPNQKHKTIQNEDDAFIMGMQERQFPSQSKILKLRMPVM*S 330
T++ ++ + R + L+F + +++Q++DD +G+QER QS ++
Sbjct: 309 TKSEADAFEEQMRKKSTLEFAAHEKRSLQSDDDEEFIGIQERD--RQSVVVPSHATSS-E 365
Query: 331 MTLLLPRKVY 360
+T L P VY
Sbjct: 366 ITGLFPNSVY 375
>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 171 LFGRVLGFLEQLAG*FLKGISDRFLGFENFRCIRH 67
LF +++GFL +AG F G +GF C+RH
Sbjct: 246 LFAKIVGFLSMVAGEFGFGTVYHGIGFFQL-CVRH 279
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +3
Query: 117 PSRTSQPTARENREHVRTSNR*KQSIHKTKVSKSETQNNTKRRRCFYNGHAGEAVPITIE 296
P T +PT E E TS + + K + + N + CFYN H + ++
Sbjct: 246 PRSTRRPTTTE--EPTTTSRKPRPG-WKGDTEYNYPERNLPLKGCFYNNHGYACCNLKLQ 302
Query: 297 DLETENASDVIND 335
+ E A +++N+
Sbjct: 303 NKMEELADELLNN 315
>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 171 LFGRVLGFLEQLAG*FLKGISDRFLGFENFRCIRH 67
LF +++GFL +AG F G +GF C+RH
Sbjct: 246 LFAKIVGFLSMVAGEFGFGTVYHGIGFFQL-CVRH 279
>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 171 LFGRVLGFLEQLAG*FLKGISDRFLGFENFRCIRH 67
LF +++GFL +AG F G +GF C+RH
Sbjct: 246 LFAKIVGFLSMVAGEFGFGTVYHGIGFFQL-CVRH 279
>AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical
protein Y67H2A.4a protein.
Length = 561
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 359 YTFLGSSRVIDHITGILSFKIFDCDGN 279
Y FL + H L+FKIFD DGN
Sbjct: 289 YLFLMTLLSTSHADFALAFKIFDVDGN 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,339,716
Number of Sequences: 27780
Number of extensions: 252348
Number of successful extensions: 862
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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