Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30761
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.50 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.87 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 9/63 (14%)
 Frame = +3

Query: 279  TPIPSVDNTTICPDAFKCPD------LHPDPTMC--YYR-GASYTDRSPLPQNLIKNPCS 431
            T I S   TT  P+   C +       HPD   C  YY          P P NL+ NP  
Sbjct: 898  TSISSGQYTTKDPNEVTCDEEEGHISYHPDKADCRMYYMCEGERKHHMPCPSNLVFNPDQ 957

Query: 432  QAC 440
              C
Sbjct: 958  NVC 960


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 420 NPCSQACSCRISDG 461
           NPC     CRISDG
Sbjct: 383 NPCQNGGVCRISDG 396


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 638 GDFRAPEHKEDCICT 682
           GD R P+  ++C+CT
Sbjct: 555 GDNRPPDCGQNCMCT 569


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,761
Number of Sequences: 336
Number of extensions: 4273
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)