Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30761
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    45   3e-06
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    24   4.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   5.9  

>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +3

Query: 261 YLELGCTPIPSVDNTTICPDAFKCPDL-HPDPTMCYYRGASYTDRSPL-PQNLIKNPCSQ 434
           Y ELGC PI  ++    CP  ++CP+L   D   CY+ G  Y   + L P     + CS 
Sbjct: 35  YAELGCKPI--LEEGQCCPKRYQCPELTDRDGNKCYFNGNIYPAGAKLAPTEQEIHSCSP 92

Query: 435 ACSC 446
           AC C
Sbjct: 93  ACFC 96


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 675 MQSSLCSGARKSPPPYTFCRPLGRFLTLRLRPCPQTFAVL 556
           +Q++ C+     P PY  C P   F T     CP T A L
Sbjct: 17  LQNAHCACPYAHPYPYDVCGPNEEFQTCG-TACPNTCADL 55


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 83  KCGRRVSSKQYSTGRIVLIQIIPFEIRVEQNRQ*KC 190
           +C R+  SK    GR+  ++++P   R+    Q  C
Sbjct: 398 QCKRKHHSKLCKIGRLSEVEVVPSTSRLTATAQANC 433


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 845,264
Number of Sequences: 2352
Number of extensions: 17618
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)