Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30761
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    31   1.2  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    31   1.2  
AC084153-16|AAK84590.1|  233|Caenorhabditis elegans Hypothetical...    28   6.3  
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical
           protein F32A7.5c protein.
          Length = 877

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 318 DAFKCPDLHPDPTMCYYRGASYTDRSPLPQNLIKNP 425
           DAFK P+ HP+P +    G S  D+ P P +  K P
Sbjct: 462 DAFKKPEPHPEPNV---SGGSEEDKIPEPVDAFKKP 494


>Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical
           protein F32A7.5a protein.
          Length = 878

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 318 DAFKCPDLHPDPTMCYYRGASYTDRSPLPQNLIKNP 425
           DAFK P+ HP+P +    G S  D+ P P +  K P
Sbjct: 462 DAFKKPEPHPEPNV---SGGSEEDKIPEPVDAFKKP 494


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/57 (21%), Positives = 22/57 (38%)
 Frame = +3

Query: 276  CTPIPSVDNTTICPDAFKCPDLHPDPTMCYYRGASYTDRSPLPQNLIKNPCSQACSC 446
            CT    +D+  +C   F C D   + ++C+    S  ++    Q  +       C C
Sbjct: 3194 CTSGECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKPLCEQKCMDMKIGYKCDC 3250


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/57 (21%), Positives = 22/57 (38%)
 Frame = +3

Query: 276  CTPIPSVDNTTICPDAFKCPDLHPDPTMCYYRGASYTDRSPLPQNLIKNPCSQACSC 446
            CT    +D+  +C   F C D   + ++C+    S  ++    Q  +       C C
Sbjct: 3194 CTSGECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKPLCEQKCMDMKIGYKCDC 3250


>AC084153-16|AAK84590.1|  233|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.16 protein.
          Length = 233

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 722 CNKLSCPLSHSSRMYRCSLPCV 657
           CNK +CP  HS+R   C + CV
Sbjct: 203 CNKSTCPFDHSNRPRTC-MTCV 223


>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
            T13H2.5a protein.
          Length = 2471

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
 Frame = +3

Query: 390  RSPLPQNLIKNPCSQACSCRISDGEPQFDCAAVDCVESFDPT-SRSASKRTNWTHVAAQQ 566
            R+P    L  N C +A  C + +G+ +      D   S D T + S S+ T+ +    Q 
Sbjct: 677  RAPGTNRLSMNVCPEAGLCVLKEGKKKLVIPPEDYEISSDETVTLSDSEETSPSAEMEQS 736

Query: 567  MSAGKDAIAALKTCQVDGKTYREGEIFEPQNTRKTASVHPTGVTQRTTQLIAETSIA 737
             ++       +KT   + +T       EP +T +   +H   +  R  +L  ++ ++
Sbjct: 737  ETSEAGPSTIIKTSGTERETQGSSSPSEP-STSRDRKMHKRKLDTRRRKLADDSDLS 792


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,368,303
Number of Sequences: 27780
Number of extensions: 419251
Number of successful extensions: 1287
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)