Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30759
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.1  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +1

Query: 178 WDPKDGELCLVRSKSGETLMEDRSDSTCKSIVGTGYRGERLIEPSSSWFRPKF 336
           ++P+  E+ L  ++S E  ME    ++      T Y   +L+E    + R K+
Sbjct: 57  FEPQQFEVSLSENRSHEPEMERPKGASNGKRARTAYTSSQLVELEREFHRSKY 109


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +1

Query: 178 WDPKDGELCLVRSKSGETLMEDRSDSTCKSIVGTGYRGERLIEPSSSWFRPKF 336
           ++P+  E+ L  ++S E  ME    ++      T Y   +L+E    + R K+
Sbjct: 77  FEPQQFEVSLSENRSHEPEMERPKGASNGKRARTAYTSSQLVELEREFHRSKY 129


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/63 (23%), Positives = 24/63 (38%)
 Frame = -3

Query: 314 LDGSISLSPLYPVPTIDLHVESLRSSIRVSPDFDLTRHSSPSFGSQHLCSERAFIH*LET 135
           +D S + S  +   T D H  S  +   + P   L+     + G +HL   R     L  
Sbjct: 561 IDESSNSSNYFANKTYDFHNMSFENDFIIQPKHLLSIARQVALGMEHLAKTRVVHRDLAA 620

Query: 134 RRL 126
           R +
Sbjct: 621 RNV 623


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/34 (26%), Positives = 14/34 (41%)
 Frame = -2

Query: 726 CIGKTFQRHPFSGLVASAGEVRCTLLSGFRLPWP 625
           CI +  +R    G +       C++L G    WP
Sbjct: 60  CINQRCERRHIKGAIPVVSLSTCSMLCGSTQLWP 93


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 708 QRHPFSGLVASAGEVRC 658
           +RHPF+ L  SAG   C
Sbjct: 435 KRHPFAYLPFSAGPRNC 451


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 708 QRHPFSGLVASAGEVRC 658
           +RHPF+ L  SAG   C
Sbjct: 435 KRHPFAYLPFSAGPRNC 451


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 708 QRHPFSGLVASAGEVRC 658
           +RHPF+ +  SAG   C
Sbjct: 419 KRHPFAYIPFSAGSRNC 435


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 708 QRHPFSGLVASAGEVRC 658
           +RHPF+ +  SAG   C
Sbjct: 419 KRHPFAYIPFSAGSRNC 435


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,731
Number of Sequences: 336
Number of extensions: 4165
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)