Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30759
         (760 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1143 + 27971561-27972670,27973868-27974458                       31   1.3  
04_04_0245 - 23872901-23872906,23873567-23873600,23874497-238747...    28   7.0  
02_05_0943 + 32976990-32976996,32977119-32977464,32977586-329777...    28   7.0  
11_01_0489 + 3776563-3776692,3776995-3777073,3777532-3777840,377...    28   9.3  
05_05_0334 + 24156532-24156565,24156681-24156782,24157145-241572...    28   9.3  
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331...    28   9.3  

>06_03_1143 + 27971561-27972670,27973868-27974458
          Length = 566

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 723 IGKTFQRHPFSGLVASAGEVRCTLLSGFRLP 631
           + +TF+RHP S  V S    R T L G+R+P
Sbjct: 404 VKETFRRHPPSHFVLSHAATRDTELGGYRVP 434


>04_04_0245 -
           23872901-23872906,23873567-23873600,23874497-23874765,
           23876691-23876741
          Length = 119

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 235 MEDRSDSTCKSIVGTGYRGERLIEPSSSW 321
           + D  +ST  S  G G+R  +L+E  SSW
Sbjct: 64  LADERESTATSPEGMGHRPAKLLEEHSSW 92


>02_05_0943 +
           32976990-32976996,32977119-32977464,32977586-32977796,
           32977997-32978072,32978175-32978277,32978601-32978669,
           32978785-32978821,32978904-32978978,32979052-32979103,
           32979188-32979232,32979342-32979442
          Length = 373

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 229 TLMEDRSDSTCKSIVGTGYRGERLI 303
           TL+ED S+ T + +VG G+R  R++
Sbjct: 177 TLLEDNSNPTSEVLVGMGFRSMRIM 201


>11_01_0489 +
           3776563-3776692,3776995-3777073,3777532-3777840,
           3778828-3778898,3778975-3779213,3779306-3779383,
           3779734-3780156,3780416-3780661,3780886-3780978,
           3781480-3781527
          Length = 571

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 262 KSIVGTGYRGERLIEPSSSWFRPKFPSG 345
           + + GTG      + PSS+WF P+  SG
Sbjct: 12  RCVFGTGPLPPASLSPSSAWFDPELSSG 39


>05_05_0334 +
           24156532-24156565,24156681-24156782,24157145-24157274,
           24157361-24157445,24157525-24157666,24157762-24157894,
           24157993-24158254,24158331-24158519,24158596-24158721,
           24158809-24159195,24159288-24159398,24159629-24160423,
           24161114-24161255,24161350-24162518,24162609-24162818,
           24163010-24163478,24164037-24164464
          Length = 1637

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +1

Query: 535 LWDEPNVL*GA*KTLMGHHERRWSLMTAGRWPWKSESAKECATNFTC 675
           LW   N   G     +GHH     +  AG      +S +E A NFTC
Sbjct: 506 LWQVANQF-GRSAEQLGHHLTLTKIPEAGELDSGKDSPEEVAANFTC 551


>01_06_1087 -
           34430521-34430899,34432336-34432806,34432926-34433112,
           34433470-34433599,34433794-34434125,34434566-34435050,
           34435185-34435752,34436579-34436640,34437569-34437636
          Length = 893

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -3

Query: 443 KFENRLRSFRPQCL*SFALPDETVLKFYIDASYPEGNF-GRNQLLDGSISLSPLY 282
           K E  LRSF       + LP     K+ I A++  GN+ GRN    GS  L  L+
Sbjct: 93  KQEETLRSFPDGQRNCYTLPTNRSKKYLIRATFTYGNYDGRNSSESGSPFLFGLH 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,976,663
Number of Sequences: 37544
Number of extensions: 516129
Number of successful extensions: 1147
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)