Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30759
(760 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 51 1e-06
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 46 4e-05
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_30216| Best HMM Match : TIL (HMM E-Value=3.1) 40 0.002
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2) 34 0.11
SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_46486| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.7) 30 1.8
SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2) 30 2.3
SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.1
SB_1848| Best HMM Match : Galactosyl_T (HMM E-Value=1.4e-26) 29 5.4
SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022) 28 7.2
SB_23401| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 28 7.2
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/64 (48%), Positives = 36/64 (56%)
Frame = -3
Query: 620 PAVMSDQRLSWCPMSVF*APYNTFGSSHSASSAYQNWPLGTVIRSPASSFE*AGVLTHLK 441
P V SD+R W PY FGSS ASS YQN P T I P + + G+LT+LK
Sbjct: 62 PFVGSDERRLW-------HPYRAFGSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLLTNLK 113
Query: 440 FENR 429
FENR
Sbjct: 114 FENR 117
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -1
Query: 253 NRYGPPSGFPLTST*PGIVHHLSGPSICA 167
NRY PP FPL S GIVHHLSGP+ CA
Sbjct: 1 NRYEPPPEFPLASPYSGIVHHLSGPNRCA 29
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +2
Query: 560 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQR 664
+ +RS D KGVG S QQDGGHGS NPLR QR
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPLRKGQR 44
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/33 (69%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Frame = -3
Query: 260 HV-ESLRSSIRVSPDFDLTRHSSPSFGSQHLCS 165
HV ESLR+S RVS F L RHSSPSFGSQ + S
Sbjct: 32 HVHESLRASTRVSSGFTLFRHSSPSFGSQQMRS 64
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +2
Query: 560 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRT 667
+ +RS D KGVG S QQDGGHGS NPL+ T
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPLKECVTT 45
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C LPKQ ALKMDGA+ LY V
Sbjct: 42 CVTTPLPKQLALKMDGAQASHLYRAV 67
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3
Query: 573 NAHGTP*KALVAHDSRTVAMEVGIR 647
+AH TP K LVA DSRTVAMEVGIR
Sbjct: 9 DAHQTPQKVLVALDSRTVAMEVGIR 33
>SB_30216| Best HMM Match : TIL (HMM E-Value=3.1)
Length = 212
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 613 TAGRWPWKSESAKECAT 663
TAGRWPWK ESAKEC T
Sbjct: 1 TAGRWPWKLESAKECVT 17
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 15 CVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 613 TAGRWPWKSESAKECAT 663
TAGRWPWK ESAKEC T
Sbjct: 1 TAGRWPWKLESAKECVT 17
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 15 CVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 613 TAGRWPWKSESAKECAT 663
TAGRWPWK ESAKEC T
Sbjct: 80 TAGRWPWKLESAKECVT 96
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 94 CVTTHLPKQLALKMDGAQASHLYRAV 119
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +2
Query: 560 KAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRT 667
+ +RS D KGVG S QQDGGHGS NP + T
Sbjct: 10 RCQSRRSSDPTKGVGCSRQQDGGHGSWNPAKECVTT 45
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 42 CVTTHLPKQLALKMDGAQASHLYRAV 67
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/25 (76%), Positives = 19/25 (76%)
Frame = -3
Query: 551 FGSSHSASSAYQNWPLGTVIRSPAS 477
FGSS ASSAYQN PLGT I PAS
Sbjct: 21 FGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 630 MEVGIR*GVCNELHLPKQPALKMDGAETFCLYTTV 734
MEVG C HLPKQ ALKMDGA+ LY V
Sbjct: 1 MEVGSA-KECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 630 MEVGIR*GVCNELHLPKQPALKMDGAETFCLYTTV 734
MEVG C HLPKQ ALKMDGA+ LY V
Sbjct: 1 MEVGSA-KECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 35.1 bits (77), Expect = 0.062
Identities = 21/37 (56%), Positives = 22/37 (59%)
Frame = +3
Query: 624 VAMEVGIR*GVCNELHLPKQPALKMDGAETFCLYTTV 734
VAMEV C HLPKQ ALKMDGA+ LY V
Sbjct: 5 VAMEVESA-KECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 630 MEVGIR*GVCNELHLPKQPALKMDGAETFCLYTTV 734
MEVG C HLPKQ ALKMDGA+ LY V
Sbjct: 1 MEVGSA-KECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 35.1 bits (77), Expect = 0.062
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 630 MEVGIR*GVCNELHLPKQPALKMDGAETFCLYTTV 734
MEVG C HLPKQ ALKMDGA+ LY V
Sbjct: 1 MEVGSA-KECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 16 CVTTHLPKQLALKMDGAQASHLYRAV 41
>SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 9 CVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 657 CNELHLPKQPALKMDGAETFCLYTTV 734
C HLPKQ ALKMDGA+ LY V
Sbjct: 15 CVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 33.1 bits (72), Expect = 0.25
Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -2
Query: 723 IGKTFQRHPFSGLVASAGEVRCTLLSGFRLPWPPSCCHERPTPFMVSHERFLGALQYVWF 544
IG T +RHPFSGLVASA E+PTPF+ S ER L L +
Sbjct: 24 IGATLERHPFSGLVASA---------------------EQPTPFVGSDERRLWHLNRAFG 62
Query: 543 IPQ-RQFCLPKLATWHRHQISGF 478
+ K T + H +SGF
Sbjct: 63 SSRIASSAYQKWPTRNSHSLSGF 85
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 61 FGSSRIASSAYQKWP 75
>SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 253 NRYGPPSGFPLTST*PGIVHH 191
NRY PP FPL S GIVHH
Sbjct: 1 NRYEPPPEFPLASPYSGIVHH 21
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 33.1 bits (72), Expect = 0.25
Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -2
Query: 723 IGKTFQRHPFSGLVASAGEVRCTLLSGFRLPWPPSCCHERPTPFMVSHERFLGALQYVWF 544
IG T +RHPFSGLVASA E+PTPF+ S ER L L +
Sbjct: 22 IGATLERHPFSGLVASA---------------------EQPTPFVGSDERRLWHLNRAFG 60
Query: 543 IPQ-RQFCLPKLATWHRHQISGF 478
+ K T + H +SGF
Sbjct: 61 SSRIASSAYQKWPTSNSHSLSGF 83
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 59 FGSSRIASSAYQKWP 73
>SB_48730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3
Query: 302 ISLSPLYPVPTIDLHVES 249
ISLSPLYP TIDLHV S
Sbjct: 38 ISLSPLYPNLTIDLHVRS 55
>SB_46486| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.7)
Length = 703
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 160 RSEHKCWDPKD--GELCLVRSKSGETLMEDRSDSTCKSIVGTGYRGERLIEPSSSWFRPK 333
+++ C D ++ GE +KS +T D S ++C+S++ TG + L + S RP+
Sbjct: 303 QNDLSCSDSENEGGESFSTTAKSKDTKANDYSMTSCRSVLATGLNEQSLAKRKESIRRPE 362
>SB_19187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 557 NTFGSSHSASSAYQNWP 507
+ FGSS ASSAYQ WP
Sbjct: 19 HAFGSSRIASSAYQKWP 35
>SB_40315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 58 FGSSRIASSAYQKWP 72
>SB_32500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_24543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_20448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 59 FGSSRIASSAYQKWP 73
>SB_9995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_5288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_4968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_3995| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_1350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_59236| Best HMM Match : Attractin (HMM E-Value=8.2)
Length = 125
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 100 FGSSRIASSAYQKWP 114
>SB_53668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_53194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_47973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_40285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_24609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_16426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 21 FGSSRIASSAYQKWP 35
>SB_15603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
FGSS ASSAYQ WP
Sbjct: 143 FGSSRIASSAYQKWP 157
>SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 634 KSESAKECATNFTCRSNQP*KWMALKRFAYTLP 732
K ESAKEC T + K MALKR YT+P
Sbjct: 2 KVESAKECVTTHLPKQLAL-KMMALKRRTYTVP 33
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 677 RQVKFVAHSLADSDFHGHRPAVMSDQRLSWCPMSVF 570
+ V H + ++DF G R A+M+D +L C S+F
Sbjct: 382 KTVILTTHFMDEADFLGDRIAIMADGQLRCCGSSLF 417
>SB_1848| Best HMM Match : Galactosyl_T (HMM E-Value=1.4e-26)
Length = 308
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 173 NAGTRKMVNYAWSGRSQGKP*WRTVAIRRANRSSE 277
NA RK + + W P WRTV + AN + E
Sbjct: 75 NAARRKEIRFTWGTDFLPSPRWRTVFLIGANDNQE 109
>SB_161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 551 FGSSHSASSAYQNWP 507
+GSS ASSAYQ WP
Sbjct: 21 YGSSRIASSAYQKWP 35
>SB_54195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 173 NAGTRKMVNYAWSGRSQGKP*WRTVAIRRANRSSE 277
NA RK + + W P WRTV + AN + E
Sbjct: 79 NAARRKEIRFTWGTDFLPTPRWRTVFLIGANDNQE 113
>SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022)
Length = 118
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 632 HGHRP-AVMSDQRLSWCPMSVF*APYNTFGSSHSASSAYQNWP 507
H R V+ L +C +VF PYN +SH+A A +N P
Sbjct: 31 HARRTKVVLEGPLLRYCRQAVFERPYNGRFASHAAFPARRNNP 73
>SB_23401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 714 TFQRHPFSGLVASAGEVRCTLLSGFRLPWPPSCCHE 607
+F P+S +V + E+ L+SGFRL PP C E
Sbjct: 291 SFGAMPYSAVVPN--ELLSMLMSGFRLSRPPLCPEE 324
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 632 HGHRP-AVMSDQRLSWCPMSVF*APYNTFGSSHSASSAYQNWP 507
H R V+ L +C +VF PYN +SH+A A +N P
Sbjct: 154 HARRTKVVLEGPLLRYCRQAVFERPYNGRFASHAAFPARRNNP 196
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,630,243
Number of Sequences: 59808
Number of extensions: 565087
Number of successful extensions: 1526
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1525
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -