Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30759
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane trans...    37   0.069
BC047726-1|AAH47726.1|  273|Homo sapiens OAF homolog (Drosophila...    33   0.85 
AY459296-1|AAR23238.1|  273|Homo sapiens NS5ATP13TP2 protein.          33   0.85 
U80743-1|AAB91441.1|  556|Homo sapiens CAGH32 protein.                 31   6.0  
AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related ...    31   6.0  
AB058721-1|BAB47447.1| 1157|Homo sapiens KIAA1818 protein protein.     31   6.0  

>AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane
           transporter protein protein.
          Length = 283

 Score = 37.1 bits (82), Expect = 0.069
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +2

Query: 191 MVNYAWSGRSQGKP*WRTVAI 253
           MVNYAW+GRSQ K  WR+VA+
Sbjct: 1   MVNYAWAGRSQRKLWWRSVAV 21


>BC047726-1|AAH47726.1|  273|Homo sapiens OAF homolog (Drosophila)
           protein.
          Length = 273

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = -2

Query: 660 CTLLSGFRLPWPPSC---CH--ERPTPFMVSHERFLGALQYVWFIPQRQFCL 520
           C    G  L W P     CH  +RPTP+         +  + +++PQRQ CL
Sbjct: 214 CVCRYGLSLAWYPCMLKYCHSRDRPTPYKCGIRSCQKSYSFDFYVPQRQLCL 265


>AY459296-1|AAR23238.1|  273|Homo sapiens NS5ATP13TP2 protein.
          Length = 273

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = -2

Query: 660 CTLLSGFRLPWPPSC---CH--ERPTPFMVSHERFLGALQYVWFIPQRQFCL 520
           C    G  L W P     CH  +RPTP+         +  + +++PQRQ CL
Sbjct: 214 CVCRYGLSLAWYPCMLKYCHSRDRPTPYKCGIRSCQKSYSFDFYVPQRQLCL 265


>U80743-1|AAB91441.1|  556|Homo sapiens CAGH32 protein.
          Length = 556

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 637 TSMATVLLS*--ATNAFHGVP*AFFRRLTIRLVHPTAPVLLTKIGHLAPS 494
           TSM T  +S     N   GVP A F+ +  RL  P AP  LT  G  AP+
Sbjct: 161 TSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPA 210


>AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related
            protein protein.
          Length = 3124

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 637  TSMATVLLS*--ATNAFHGVP*AFFRRLTIRLVHPTAPVLLTKIGHLAPS 494
            TSM T  +S     N   GVP A F+ +  RL  P AP  LT  G  AP+
Sbjct: 2587 TSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPA 2636


>AB058721-1|BAB47447.1| 1157|Homo sapiens KIAA1818 protein protein.
          Length = 1157

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 637 TSMATVLLS*--ATNAFHGVP*AFFRRLTIRLVHPTAPVLLTKIGHLAPS 494
           TSM T  +S     N   GVP A F+ +  RL  P AP  LT  G  AP+
Sbjct: 620 TSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPA 669


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,184,261
Number of Sequences: 237096
Number of extensions: 2671534
Number of successful extensions: 8825
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8821
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)