BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30759 (760 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 37 0.069 BC047726-1|AAH47726.1| 273|Homo sapiens OAF homolog (Drosophila... 33 0.85 AY459296-1|AAR23238.1| 273|Homo sapiens NS5ATP13TP2 protein. 33 0.85 U80743-1|AAB91441.1| 556|Homo sapiens CAGH32 protein. 31 6.0 AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related ... 31 6.0 AB058721-1|BAB47447.1| 1157|Homo sapiens KIAA1818 protein protein. 31 6.0 >AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane transporter protein protein. Length = 283 Score = 37.1 bits (82), Expect = 0.069 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = +2 Query: 191 MVNYAWSGRSQGKP*WRTVAI 253 MVNYAW+GRSQ K WR+VA+ Sbjct: 1 MVNYAWAGRSQRKLWWRSVAV 21 >BC047726-1|AAH47726.1| 273|Homo sapiens OAF homolog (Drosophila) protein. Length = 273 Score = 33.5 bits (73), Expect = 0.85 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -2 Query: 660 CTLLSGFRLPWPPSC---CH--ERPTPFMVSHERFLGALQYVWFIPQRQFCL 520 C G L W P CH +RPTP+ + + +++PQRQ CL Sbjct: 214 CVCRYGLSLAWYPCMLKYCHSRDRPTPYKCGIRSCQKSYSFDFYVPQRQLCL 265 >AY459296-1|AAR23238.1| 273|Homo sapiens NS5ATP13TP2 protein. Length = 273 Score = 33.5 bits (73), Expect = 0.85 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -2 Query: 660 CTLLSGFRLPWPPSC---CH--ERPTPFMVSHERFLGALQYVWFIPQRQFCL 520 C G L W P CH +RPTP+ + + +++PQRQ CL Sbjct: 214 CVCRYGLSLAWYPCMLKYCHSRDRPTPYKCGIRSCQKSYSFDFYVPQRQLCL 265 >U80743-1|AAB91441.1| 556|Homo sapiens CAGH32 protein. Length = 556 Score = 30.7 bits (66), Expect = 6.0 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -1 Query: 637 TSMATVLLS*--ATNAFHGVP*AFFRRLTIRLVHPTAPVLLTKIGHLAPS 494 TSM T +S N GVP A F+ + RL P AP LT G AP+ Sbjct: 161 TSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPA 210 >AY044869-1|AAK97789.1| 3124|Homo sapiens p400 SWI2/SNF2-related protein protein. Length = 3124 Score = 30.7 bits (66), Expect = 6.0 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -1 Query: 637 TSMATVLLS*--ATNAFHGVP*AFFRRLTIRLVHPTAPVLLTKIGHLAPS 494 TSM T +S N GVP A F+ + RL P AP LT G AP+ Sbjct: 2587 TSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPA 2636 >AB058721-1|BAB47447.1| 1157|Homo sapiens KIAA1818 protein protein. Length = 1157 Score = 30.7 bits (66), Expect = 6.0 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -1 Query: 637 TSMATVLLS*--ATNAFHGVP*AFFRRLTIRLVHPTAPVLLTKIGHLAPS 494 TSM T +S N GVP A F+ + RL P AP LT G AP+ Sbjct: 620 TSMPTGAVSGNVIVNTIAGVPAATFQSINKRLASPVAPGALTTPGGSAPA 669 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 114,184,261 Number of Sequences: 237096 Number of extensions: 2671534 Number of successful extensions: 8825 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 8702 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8821 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 9183116696 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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