Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30756
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   1.9  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   2.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.5  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   5.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   5.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   5.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.7  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 319 INVRCSTCISSVTTALILTSII 384
           INV    C S +TT L+L +++
Sbjct: 507 INVLAEACGSDITTRLLLPTVL 528


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -2

Query: 513 PRRRASSPQAIRRASDA 463
           PRR  SSP   R ASDA
Sbjct: 121 PRREWSSPPDARAASDA 137


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -2

Query: 513 PRRRASSPQAIRRASDA 463
           PRR  SSP   R ASDA
Sbjct: 277 PRREWSSPPDARAASDA 293


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 363 ADLNFDNPKVVEKFDMVLKAWMGAGASGVRLNNARHL 473
           ADLN  +  V  K    +   +  G +G R++ A+H+
Sbjct: 172 ADLNQGSDYVRSKIIEYMNHLVDLGVAGFRVDAAKHM 208


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 363 ADLNFDNPKVVEKFDMVLKAWMGAGASGVRLNNARHL 473
           ADLN  +  V  K    +   +  G +G R++ A+H+
Sbjct: 173 ADLNQGSDYVRSKIIEYMNHLVDLGVAGFRVDAAKHM 209


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 363 ADLNFDNPKVVEKFDMVLKAWMGAGASGVRLNNARHL 473
           ADLN  +  V  K    +   +  G +G R++ A+H+
Sbjct: 173 ADLNQGSDYVRSKIIEYMNHLVDLGVAGFRVDAAKHM 209


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 172 LIPNYVFTNHTWFVQSENSTEPYTDYFIGPRNNLLI 279
           L+  Y+++ H  + QS+N        F G   NL+I
Sbjct: 11  LLLYYIYSKHYSYWQSKNVPTDKPFLFFGSFYNLVI 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,445
Number of Sequences: 336
Number of extensions: 3057
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)