Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30756
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 57 2e-10
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 56 3e-10
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 56 3e-10
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 55 6e-10
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 26 0.42
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.0
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 56.8 bits (131), Expect = 2e-10
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +3
Query: 270 PANWVSKINTPAFTRSDKRQMFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMGAGASGV 449
P NW+S N +T + R+ FY HQF DLN+ N V E+ ++K W+ G G
Sbjct: 168 PNNWLSVFNGTGWTFHEGRKQFYFHQFYKQQPDLNYRNSDVREEMKNIMKFWLDKGIDGF 227
Query: 450 RLNNARHL 473
R++ HL
Sbjct: 228 RIDAVPHL 235
Score = 41.9 bits (94), Expect = 6e-06
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +1
Query: 106 TLDEFKILFNKIKKIGVRVIVDLIPNYVFTNHTWFVQS-----ENSTEPYTDYFI 255
T+ + + L + KK ++VI+DL+PN+ H WF S N+T Y DY+I
Sbjct: 96 TIKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYI 150
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 56.4 bits (130), Expect = 3e-10
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 270 PANWVSKINTPAFTRSDKRQMFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMGAGASGV 449
P NWV A++ ++RQ +YLHQF DLN+ NP V++ VL+ W+ G G
Sbjct: 161 PTNWVGVFGGSAWSWREERQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLRFWLRRGFDGF 220
Query: 450 RLN 458
R++
Sbjct: 221 RVD 223
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 106 TLDEFKILFNKIKKIGVRVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFI 255
T+ + L + + G+++I+D +PN+ H WF S + EPY +Y+I
Sbjct: 98 TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 56.4 bits (130), Expect = 3e-10
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 270 PANWVSKINTPAFTRSDKRQMFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMGAGASGV 449
P NWV A++ ++RQ +YLHQF DLN+ NP V++ VL+ W+ G G
Sbjct: 161 PTNWVGVFGGSAWSWREERQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLRFWLRRGFDGF 220
Query: 450 RLN 458
R++
Sbjct: 221 RVD 223
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 106 TLDEFKILFNKIKKIGVRVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFI 255
T+ + L + + G+++I+D +PN+ H WF S + EPY +Y+I
Sbjct: 98 TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYI 147
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 55.2 bits (127), Expect = 6e-10
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +3
Query: 258 TKEQPANWVSKINTPAFTRSDKRQMFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMGAG 437
T++ P NW+S A+ +++R+ +YLHQF DLN+ + + ++ VL WM G
Sbjct: 157 TRQPPNNWLSVFWGSAWQWNEERKQYYLHQFATGQPDLNYRSAALDQEMKNVLTFWMNRG 216
Query: 438 ASGVRLNNARHLL--VELLEE 494
G R++ H+ LL+E
Sbjct: 217 VDGFRIDAINHMFEDARLLDE 237
Score = 48.4 bits (110), Expect = 7e-08
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 106 TLDEFKILFNKIKKIGVRVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFI 255
TL +F L + K +G++VI+D +PN+ H WF +S +PY +Y++
Sbjct: 98 TLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQRIKPYDEYYV 147
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 25.8 bits (54), Expect = 0.42
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 637 DGVHAEGRWLPAGP 678
D +H E R+LPAGP
Sbjct: 4 DSIHWEARYLPAGP 17
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 623 KESEPTVFTLKEDGSLP 673
K EPTV + +DGS P
Sbjct: 613 KYEEPTVGEISQDGSSP 629
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 642 TVGSDSLVTIFDQRAKSSLS 583
T+G SL+T+ Q AKS S
Sbjct: 278 TLGVTSLLTLSTQHAKSQAS 297
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,557
Number of Sequences: 438
Number of extensions: 4221
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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