Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30755
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   169   6e-44
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.82 
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    24   5.8  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   7.7  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  169 bits (412), Expect = 6e-44
 Identities = 81/134 (60%), Positives = 100/134 (74%)
 Frame = +1

Query: 256 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 435
           VL NFHGM LTTDKLR MV KWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCY
Sbjct: 99  VLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCY 158

Query: 436 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FLTPLPRTSRRPAMGIYPLRDVCIRKV 615
           AQH+Q++ IR KM  II R++T++D            + +   +    +YPL DV IRKV
Sbjct: 159 AQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKV 218

Query: 616 KVLKRPRFEISKLM 657
           KVLK+PRF++S LM
Sbjct: 219 KVLKKPRFDLSSLM 232



 Score =  147 bits (357), Expect = 3e-37
 Identities = 69/84 (82%), Positives = 75/84 (89%)
 Frame = +2

Query: 2   KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
           KKG KKK+VDPFTRKDWYDVKAP+MF  RQ G TLVNRTQGTKIAS+GLKGRVFEVSLAD
Sbjct: 14  KKGSKKKVVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLAD 73

Query: 182 LQADTDAERSFRKFRLIAEYVQGR 253
           LQ + DAERSFRKF+L+AE V GR
Sbjct: 74  LQNEPDAERSFRKFKLVAESVNGR 97


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 582 LPSARCLHPKGESVEEAPFRDLEVDGT 662
           +P   C H  G ++E+A    LE DGT
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGT 583


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -2

Query: 691 PPCLHRFRREVPSTSRSRNGASSTLSPF--GCKHRAEGRCPWQAF-SMSLAMESGINLFT 521
           PP LH+ ++  P++  + +G  S L P+      R  GR  +  + ++ L  E   N + 
Sbjct: 210 PPPLHQGQQAPPNSQNASSGLQSPLYPWMRSQFERKRGRQTYTRYQTLELEKEFHFNRYL 269

Query: 520 T 518
           T
Sbjct: 270 T 270


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -2

Query: 742 LERKLVAFRPFRTCLRLPPCLHRFRREVPSTSRSR 638
           LE    A+ PF+  L      HR  R VP   R +
Sbjct: 96  LETVAKAYEPFKAALESEQDAHRSLRLVPELQRKQ 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,935
Number of Sequences: 2352
Number of extensions: 18244
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)