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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30755
         (752 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal pr...   174   1e-43
AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB, i...   174   1e-43
AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA, i...   174   1e-43
Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal prot...   168   8e-42
AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD, i...   157   2e-38
AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p pro...   140   2e-33

>AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal
           protein S3a protein.
          Length = 268

 Score =  174 bits (423), Expect = 1e-43
 Identities = 83/134 (61%), Positives = 100/134 (74%)
 Frame = +1

Query: 256 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 435
           VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD  SQRKTCY
Sbjct: 99  VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 158

Query: 436 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FLTPLPRTSRRPAMGIYPLRDVCIRKV 615
           AQ +QVR IR +M +IIT +V+ +D  +      L  + +   +    IYPL DV IRKV
Sbjct: 159 AQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKV 218

Query: 616 KVLKRPRFEISKLM 657
           KVLK+PRF++SKL+
Sbjct: 219 KVLKKPRFDVSKLL 232



 Score =  140 bits (339), Expect = 2e-33
 Identities = 67/84 (79%), Positives = 73/84 (86%)
 Frame = +2

Query: 2   KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
           KKG KKK+VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLAD
Sbjct: 14  KKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLAD 73

Query: 182 LQADTDAERSFRKFRLIAEYVQGR 253
           LQ D D ERSFRKFRLIAE VQ R
Sbjct: 74  LQKDIDPERSFRKFRLIAEDVQDR 97


>AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB,
           isoform B protein.
          Length = 218

 Score =  174 bits (423), Expect = 1e-43
 Identities = 83/134 (61%), Positives = 100/134 (74%)
 Frame = +1

Query: 256 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 435
           VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD  SQRKTCY
Sbjct: 49  VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 108

Query: 436 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FLTPLPRTSRRPAMGIYPLRDVCIRKV 615
           AQ +QVR IR +M +IIT +V+ +D  +      L  + +   +    IYPL DV IRKV
Sbjct: 109 AQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKV 168

Query: 616 KVLKRPRFEISKLM 657
           KVLK+PRF++SKL+
Sbjct: 169 KVLKKPRFDVSKLL 182



 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = +2

Query: 152 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGR 253
           GRVFEVSLADLQ D D ERSFRKFRLIAE VQ R
Sbjct: 14  GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDR 47


>AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA,
           isoform A protein.
          Length = 268

 Score =  174 bits (423), Expect = 1e-43
 Identities = 83/134 (61%), Positives = 100/134 (74%)
 Frame = +1

Query: 256 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 435
           VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD  SQRKTCY
Sbjct: 99  VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 158

Query: 436 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FLTPLPRTSRRPAMGIYPLRDVCIRKV 615
           AQ +QVR IR +M +IIT +V+ +D  +      L  + +   +    IYPL DV IRKV
Sbjct: 159 AQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKV 218

Query: 616 KVLKRPRFEISKLM 657
           KVLK+PRF++SKL+
Sbjct: 219 KVLKKPRFDVSKLL 232



 Score =  140 bits (339), Expect = 2e-33
 Identities = 67/84 (79%), Positives = 73/84 (86%)
 Frame = +2

Query: 2   KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
           KKG KKK+VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLAD
Sbjct: 14  KKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLAD 73

Query: 182 LQADTDAERSFRKFRLIAEYVQGR 253
           LQ D D ERSFRKFRLIAE VQ R
Sbjct: 74  LQKDIDPERSFRKFRLIAEDVQDR 97


>Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal protein
           S3a protein.
          Length = 270

 Score =  168 bits (408), Expect = 8e-42
 Identities = 82/135 (60%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
 Frame = +1

Query: 256 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 435
           VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD  SQRKTCY
Sbjct: 100 VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 159

Query: 436 AQHTQVRAIRK-KMCEIITRDVTNSDSGRW*TS*FLTPLPRTSRRPAMGIYPLRDVCIRK 612
           A  +QVR IR  +M +IIT +V+ +D  +      L  + +   +    IYPL DV IRK
Sbjct: 160 AHESQVRKIRSGRMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRK 219

Query: 613 VKVLKRPRFEISKLM 657
           VKVLK+PRF++SKL+
Sbjct: 220 VKVLKKPRFDVSKLL 234



 Score =  130 bits (315), Expect = 2e-30
 Identities = 64/85 (75%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA- 178
           KKG KKK+VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+  KGRVFEVSL  
Sbjct: 14  KKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVP 73

Query: 179 DLQADTDAERSFRKFRLIAEYVQGR 253
           DLQ D D E SFRKFRLIAE VQ R
Sbjct: 74  DLQKDIDPEHSFRKFRLIAEDVQDR 98


>AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD,
           isoform D protein.
          Length = 163

 Score =  157 bits (380), Expect = 2e-38
 Identities = 76/127 (59%), Positives = 93/127 (73%)
 Frame = +1

Query: 277 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 456
           MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD  SQRKTCYAQ +QVR
Sbjct: 1   MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60

Query: 457 AIRKKMCEIITRDVTNSDSGRW*TS*FLTPLPRTSRRPAMGIYPLRDVCIRKVKVLKRPR 636
            IR +M +IIT +V+ +D  +      L  + +   +    IYPL DV IRKVKVLK+PR
Sbjct: 61  KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120

Query: 637 FEISKLM 657
           F++SKL+
Sbjct: 121 FDVSKLL 127


>AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p
           protein.
          Length = 217

 Score =  140 bits (339), Expect = 2e-33
 Identities = 67/84 (79%), Positives = 73/84 (86%)
 Frame = +2

Query: 2   KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 181
           KKG KKK+VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQG +IAS+ LKGRVFEVSLAD
Sbjct: 14  KKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLAD 73

Query: 182 LQADTDAERSFRKFRLIAEYVQGR 253
           LQ D D ERSFRKFRLIAE VQ R
Sbjct: 74  LQKDIDPERSFRKFRLIAEDVQDR 97



 Score =  138 bits (335), Expect = 6e-33
 Identities = 67/104 (64%), Positives = 80/104 (76%)
 Frame = +1

Query: 256 VLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 435
           VLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD  SQRKTCY
Sbjct: 99  VLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCY 158

Query: 436 AQHTQVRAIRKKMCEIITRDVTNSDSGRW*TS*FLTPLPRTSRR 567
           AQ +QVR IR +M +IIT +V+ +D  +  TS   T L + S++
Sbjct: 159 AQQSQVRKIRARMTDIITNEVSGADLKQLLTSWPWTRLRKISKK 202


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,030,794
Number of Sequences: 53049
Number of extensions: 773262
Number of successful extensions: 2618
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2611
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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