Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30752
         (822 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    46   2e-05
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    46   2e-05
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    40   0.002
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    40   0.002
U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    31   0.75 
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    31   0.75 
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    28   9.3  

>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +2

Query: 299 GVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPNSARIANTYIE-KSGGRV 475
           GV +   N V+L   FT+ P F +T  K++GA  K LD + P + +  N+++   + G++
Sbjct: 80  GVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPAAVQEINSFVNTATNGKI 139

Query: 476 SNVLRSDDFQE 508
            N+   D  ++
Sbjct: 140 KNIATQDSIKD 150


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +2

Query: 299 GVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPNSARIANTYIE-KSGGRV 475
           GV +   N V+L   FT+ P F +T  K++GA  K LD + P + +  N+++   + G++
Sbjct: 80  GVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPAAVQEINSFVNTATNGKI 139

Query: 476 SNVLRSDDFQE 508
            N+   D  ++
Sbjct: 140 KNIATQDSIKD 150


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = +2

Query: 257 YKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSD-PNSA 433
           +  L + V D T NGV     N VF++  +T+   +  T++K + AS + LDFS    +A
Sbjct: 64  FSGLMEAVGD-TDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAA 122

Query: 434 RIANTYIEK-SGGRVSNVLRSD 496
           +  NT++E  + G++ +++ +D
Sbjct: 123 KTMNTFVENHTNGKIKDLIPAD 144


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = +2

Query: 257 YKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSD-PNSA 433
           +  L + V D T NGV     N VF++  +T+   +  T++K + AS + LDFS    +A
Sbjct: 64  FSGLMEAVGD-TDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAA 122

Query: 434 RIANTYIEK-SGGRVSNVLRSD 496
           +  NT++E  + G++ +++ +D
Sbjct: 123 KTMNTFVENHTNGKIKDLIPAD 144


>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +2

Query: 299 GVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPN-SARIANTYI-EKSGGR 472
           G  +   N +F    FT+   +   ++K + A    L+F D   SA   N ++ E + G 
Sbjct: 90  GTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149

Query: 473 VSNVLRSDDFQEQ 511
           +  ++  D   E+
Sbjct: 150 IKKIINPDSISEE 162


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +2

Query: 299 GVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPN-SARIANTYI-EKSGGR 472
           G  +   N +F    FT+   +   ++K + A    L+F D   SA   N ++ E + G 
Sbjct: 90  GTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149

Query: 473 VSNVLRSDDFQEQ 511
           +  ++  D   E+
Sbjct: 150 IKKIINPDSISEE 162


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 395 KHRNPSGASS*RPATR*NRCPRRQSSD*PGILRSRSDRAPRPS 267
           + R+PS + S  PA R  R P +  S  P   +SRS   P P+
Sbjct: 304 RRRSPSASKSPPPARR-RRSPSQSKSPAPKRAKSRSKSPPAPA 345


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,917,595
Number of Sequences: 27780
Number of extensions: 415357
Number of successful extensions: 1142
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)