BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30749 (796 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A1Z705 Cluster: CG2144-PA; n=3; Sophophora|Rep: CG2144-... 35 2.0 UniRef50_A0L589 Cluster: Carbamoyltransferase; n=1; Magnetococcu... 33 8.3 UniRef50_Q89AY7 Cluster: Uncharacterized protein bbp_081; n=1; B... 33 8.3 >UniRef50_A1Z705 Cluster: CG2144-PA; n=3; Sophophora|Rep: CG2144-PA - Drosophila melanogaster (Fruit fly) Length = 927 Score = 35.1 bits (77), Expect = 2.0 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 5/88 (5%) Frame = -1 Query: 409 KFNIRKIVIYKFVMTLSINQXXXXXXXXXXSATLFPSSLGYVAH*NYSPNYIVSTVV*IQ 230 KF++R + +YK +MT+ + + S + + GY+ NY+P+ IV+ V + Sbjct: 764 KFSVRLVHVYKIIMTIFLARMFFFYQGNSNSLSTIDLTPGYIGQTNYNPS-IVAIFVTLN 822 Query: 229 ASHIDKQSFQFRVNRT-----RIVGVME 161 D +F + V T R VG+M+ Sbjct: 823 TYSADIHAFLYLVVHTLRSDLRSVGIMQ 850 >UniRef50_A0L589 Cluster: Carbamoyltransferase; n=1; Magnetococcus sp. MC-1|Rep: Carbamoyltransferase - Magnetococcus sp. (strain MC-1) Length = 548 Score = 33.1 bits (72), Expect = 8.3 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +2 Query: 146 EISFTFHYSNYTRSIHSELERLLINMA--CLYSHYCRHYIIRGIVLMS 283 EI+FT H N S+ LER+L+N+A L+ R+ ++ G V ++ Sbjct: 248 EINFTQHQKNVAASVQRALERVLLNLAKQALHKSGSRNLVLSGGVALN 295 >UniRef50_Q89AY7 Cluster: Uncharacterized protein bbp_081; n=1; Buchnera aphidicola (Baizongia pistaciae)|Rep: Uncharacterized protein bbp_081 - Buchnera aphidicola subsp. Baizongia pistaciae Length = 717 Score = 33.1 bits (72), Expect = 8.3 Identities = 16/70 (22%), Positives = 37/70 (52%) Frame = -3 Query: 524 LMSI*ISIGVNCRSELGCVFLQRKLMHIGSSFINYILAKVQHSQNRHLQICHDTKY*STM 345 +++I I +N + L +FL + G+ ++N++ K+++ HD +Y +T+ Sbjct: 575 IVNIKFLIDINSKDFLNTIFLSVTKLFFGNLYVNHVFFKIKNE--------HDKRYLATI 626 Query: 344 MISLFGTFLR 315 +S + F+R Sbjct: 627 CLSSYNNFMR 636 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 645,238,008 Number of Sequences: 1657284 Number of extensions: 11271155 Number of successful extensions: 22365 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 21766 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 22363 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 67908372675 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -