Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30748
         (795 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g47120.1 68418.m05809 Bax inhibitor-1 putative / BI-1 putativ...    45   7e-05
At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1 f...    42   6e-04
At5g47130.1 68418.m05810 Bax inhibitor-1 family / BI-1 family si...    38   0.006
At1g79360.1 68414.m09248 transporter-related low similarity to S...    29   3.6  
At3g49790.1 68416.m05444 expressed protein predicted protein, Ar...    28   6.2  
At2g12400.1 68415.m01339 expressed protein                             28   8.2  
At1g32910.1 68414.m04054 transferase family protein low similari...    28   8.2  

>At5g47120.1 68418.m05809 Bax inhibitor-1 putative / BI-1 putative
           SP:Q9LD45: Bax inhibitor-1 (BI-1) (AtBI-1). [Mouse-ear
           cress]             {Arabidopsis thaliana}
          Length = 247

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 28/82 (34%), Positives = 43/82 (52%)
 Frame = +3

Query: 261 VSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMSM 440
           V+++ G Y+ +      G L+ I   G M+ L++ P        RL  L    +  G S+
Sbjct: 48  VASAFGAYLHVLWNI-GGILTTIGCIGTMIWLLSCPPYEHQK--RLSLLFVSAVLEGASV 104

Query: 441 GPLLEYVSVVDPSIIITALLGT 506
           GPL++    VDPSI+ITA +GT
Sbjct: 105 GPLIKVAIDVDPSILITAFVGT 126



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 29/93 (31%), Positives = 46/93 (49%)
 Frame = +2

Query: 509 LVFVCFSAAAMLAERGSWAIPRWHIDDTVHVYVTNDFG*SVYAVTFPVPXXXXXXXXXXC 688
           + FVCFSAAAMLA R  +      +   + + +   F  S++  +  +            
Sbjct: 128 IAFVCFSAAAMLARRREYLYLGGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIF 187

Query: 689 GGFVLFDTQLIIEKRRMGSKDFVQQHWNYSLTL 787
            G+++ DTQ IIEK  +G  D+V+    +SLTL
Sbjct: 188 VGYMVVDTQEIIEKAHLGDMDYVK----HSLTL 216


>At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1
           family protein similar to SP|Q9LD45 Bax inhibitor-1
           (BI-1) (AtBI-1) {Arabidopsis thaliana}; contains Pfam
           profile PF01027: Uncharacterized protein family UPF0005
          Length = 247

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 25/89 (28%), Positives = 40/89 (44%)
 Frame = +2

Query: 509 LVFVCFSAAAMLAERGSWAIPRWHIDDTVHVYVTNDFG*SVYAVTFPVPXXXXXXXXXXC 688
           + FVCFSAAAMLA R  +      +   + +        S++  +  V            
Sbjct: 130 VAFVCFSAAAMLATRREYLYHGASLACCMSILWWVQIASSIFGGSTTVVKFELYFGLLIF 189

Query: 689 GGFVLFDTQLIIEKRRMGSKDFVQQHWNY 775
            G+++ DTQ+I EK   G  D+VQ  + +
Sbjct: 190 VGYIVVDTQMITEKAHHGDMDYVQHSFTF 218



 Score = 35.1 bits (77), Expect = 0.054
 Identities = 25/82 (30%), Positives = 43/82 (52%)
 Frame = +3

Query: 261 VSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMSM 440
           ++++ G Y+ M      G +S +  +G+M+ L  T       N+ L  L  F L  G S+
Sbjct: 52  LASAIGAYIHMVWNI-GGNVSTLGFSGIMIWLRFTL---YEPNM-LYLLFLFALLKGASV 106

Query: 441 GPLLEYVSVVDPSIIITALLGT 506
           GP++  V   D S+++TA +GT
Sbjct: 107 GPMIMLVIDFDSSVLVTAFVGT 128


>At5g47130.1 68418.m05810 Bax inhibitor-1 family / BI-1 family
           similar to SP|Q9LD45 Bax inhibitor-1 (BI-1) (AtBI-1)
           {Arabidopsis thaliana}
          Length = 187

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 390 LRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITALLGT 506
           +R   LL FG+  G S+GP ++    +D SI+ITA LGT
Sbjct: 32  IRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGT 70


>At1g79360.1 68414.m09248 transporter-related low similarity to
           SP|O76082 Organic cation/carnitine transporter 2 (Solute
           carrier family 22, member 5) (High-affinity
           sodium-dependent carnitine cotransporter) {Homo
           sapiens}; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 527

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +3

Query: 270 SAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMSMGPL 449
           S  ++V    RF  GF  A +G     ++++T   GK    R+G +  FG   G    PL
Sbjct: 162 SPNIWVYAVLRFVNGFGRATIGT--CALVLSTELVGKKWRGRVGIMSFFGFMLGFLSLPL 219

Query: 450 LEYVS 464
           + Y++
Sbjct: 220 MAYMN 224


>At3g49790.1 68416.m05444 expressed protein predicted protein,
           Arabidopsis thaliana
          Length = 366

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 237 LRHINDTCVSASAGVYVD-MFTRFQAGFLSAIVGA---GLMLMLIATPDNGKNTNL 392
           +R I+D   S      +D +FT+  +GF SAIVG+    L++ L ++  +G N+ L
Sbjct: 118 IRGIDDGSGSGFTDRVMDKLFTKSGSGFASAIVGSFARNLVVALYSSAGDGSNSKL 173


>At2g12400.1 68415.m01339 expressed protein
          Length = 541

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +1

Query: 523 LLCCCYAC*TRQ-LGYSSVAH 582
           L+C CY C  RQ  GYS VA+
Sbjct: 123 LICLCYCCCARQSYGYSRVAY 143


>At1g32910.1 68414.m04054 transferase family protein low similarity
           to anthranilate N-hydroxycinnamoyl/benzoyltransferase
           Dianthus caryophyllus GI:2239091, benzylalcohol
           acetyltransferase Clarkia breweri GI:6166336; contains
           Pfam profile PF02458 transferase family
          Length = 464

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 642 HFLYQAHLYLGPHAHVAVLYYSTHNLSLRNAEWEAKTLCNSIGI 773
           HFL  A       A   V YY+     ++N+  E + LCN+ G+
Sbjct: 57  HFLSVAETLKASLAEALVSYYAFAGELVKNSSGEPEILCNNRGV 100


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,319,163
Number of Sequences: 28952
Number of extensions: 328142
Number of successful extensions: 704
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)