Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30747
         (397 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   3.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   3.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   4.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   4.4  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   5.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 109 QHVKHNVLIISSEQFSDVNK 168
           QHV  N++ I++  + ++NK
Sbjct: 334 QHVSANIVHITAGNYFEINK 353


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 109 QHVKHNVLIISSEQFSDVNK 168
           QHV  N++ I++  + ++NK
Sbjct: 334 QHVSANIVHITAGNYFEINK 353


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 361 YRFRFRMNFWGFRKC 317
           YR+RFR+   GF  C
Sbjct: 278 YRYRFRVINAGFLNC 292


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 173 YCLFTSENC 147
           YCLF + NC
Sbjct: 115 YCLFVASNC 123


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 173 YCLFTSENC 147
           YCLF + NC
Sbjct: 115 YCLFVASNC 123


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 312 QKHFRNPQKFIRNRNL 359
           +K+F  P+KF  NR L
Sbjct: 96  EKYFPEPEKFDPNRYL 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,839
Number of Sequences: 336
Number of extensions: 1549
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)