Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30747
         (397 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2240|AAF53222.3| 1334|Drosophila melanogaster CG5792-PB...    29   1.7  
BT024943-1|ABE01173.1| 1116|Drosophila melanogaster IP16022p pro...    29   3.0  

>AE014134-2240|AAF53222.3| 1334|Drosophila melanogaster CG5792-PB,
           isoform B protein.
          Length = 1334

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 231 SNKQSNYEKRKINLKE*RTPQKHFRSPQKHFRNPQKFIRNRNLYQ 365
           SN+Q N ++  I+    + P+  FRSP+ H + P  + RN N  Q
Sbjct: 426 SNQQPNLDRNAISDDGIQLPRDRFRSPEAHPKQP-PYPRNVNADQ 469


>BT024943-1|ABE01173.1| 1116|Drosophila melanogaster IP16022p
           protein.
          Length = 1116

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 231 SNKQSNYEKRKINLKE*RTPQKHFRSPQKHFRNPQKFIRNRNLYQ 365
           SN+Q+N +   I+    + P+  FRSP+ H + P  + RN N  Q
Sbjct: 447 SNQQTNLDLNAISDDGIQLPRDRFRSPEAHPKQP-PYPRNVNADQ 490


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,734,438
Number of Sequences: 53049
Number of extensions: 252535
Number of successful extensions: 663
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)