Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30745
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.6  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   8.6  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +3

Query: 327 CVCVKYMVLCEMFFFINI---IYCLRIIKKKFAFCTP 428
           C+C  YM   +  +F N+    +  R +   F FC+P
Sbjct: 315 CLCELYMAFMDRLYFSNLDKDAFIHRTVDDYF-FCSP 350


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 109 NKFLNYFKKITIASNTQIVYLNVTMW 32
           NK+L   ++I IAS  Q+    V +W
Sbjct: 275 NKYLTRARRIEIASALQLNETQVKIW 300


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 109 NKFLNYFKKITIASNTQIVYLNVTMW 32
           NK+L   ++I IAS  Q+    V +W
Sbjct: 64  NKYLTRARRIEIASALQLNETQVKIW 89


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 109 NKFLNYFKKITIASNTQIVYLNVTMW 32
           NK+L   ++I IAS  Q+    V +W
Sbjct: 64  NKYLTRARRIEIASALQLNETQVKIW 89


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 360 MFFFINIIYCLRIIKKKFAF 419
           +F F+N+ + + I+   +AF
Sbjct: 98  IFIFVNVFFWVIILMSNYAF 117


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -1

Query: 389 TIDYVNKKKHFTQYHVFDTHTRICVY 312
           T  Y  +K    Q H++D H    +Y
Sbjct: 76  TTGYKLRKGTILQLHIYDLHYNPVIY 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,709
Number of Sequences: 336
Number of extensions: 3726
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)