Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30744
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL161712-8|CAC70133.1| 340|Caenorhabditis elegans Hypothetical ... 31 0.63
Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 28 4.5
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 28 4.5
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 28 4.5
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical ... 27 7.8
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 27 7.8
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 27 7.8
>AL161712-8|CAC70133.1| 340|Caenorhabditis elegans Hypothetical
protein Y66D12A.11 protein.
Length = 340
Score = 31.1 bits (67), Expect = 0.63
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 416 PPQNLKNSAHK*SAVVPSPRSTTKSSFIKAPLLPAPVRNHYPRSSP 553
PP N+ H +VP P S + I +LPAP + P SP
Sbjct: 223 PPSNISEQIHHQPPLVPQPESRPDPNLI---ILPAPTNDLPPAKSP 265
>Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical
protein T01B4.2c protein.
Length = 712
Score = 30.7 bits (66), Expect = 0.84
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 485 KSSFIKAPLLPAPVRNHYPRSSPKNEEQTL 574
++ F PL PAP H+P SP+ E T+
Sbjct: 71 RNGFYSTPLGPAPSEYHFPPGSPQFRESTI 100
>Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical
protein T01B4.2b protein.
Length = 733
Score = 30.7 bits (66), Expect = 0.84
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 485 KSSFIKAPLLPAPVRNHYPRSSPKNEEQTL 574
++ F PL PAP H+P SP+ E T+
Sbjct: 92 RNGFYSTPLGPAPSEYHFPPGSPQFRESTI 121
>Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical
protein T01B4.2a protein.
Length = 757
Score = 30.7 bits (66), Expect = 0.84
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 485 KSSFIKAPLLPAPVRNHYPRSSPKNEEQTL 574
++ F PL PAP H+P SP+ E T+
Sbjct: 116 RNGFYSTPLGPAPSEYHFPPGSPQFRESTI 145
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 416 PPQNLKNSAHK*SAVVPSPRSTTKSSFIKAPLLPA 520
PP L + S+V+P+P + S+ I +P +PA
Sbjct: 55 PPYELSSHILTPSSVIPTPSPSVASASISSPTIPA 89
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 452 SAVVPSPRSTTKSSFIKAPLLPAPVRNHYPRSSPKNEEQTLVYVFG 589
S+ PSP S S K P P VR + PR SP ++ ++ FG
Sbjct: 71 SSKSPSPPSAKMS---KRPNGPYSVRKYQPRGSPPSDGSDKIHRFG 113
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 452 SAVVPSPRSTTKSSFIKAPLLPAPVRNHYPRSSPKNEEQTLVYVFG 589
S+ PSP S S K P P VR + PR SP ++ ++ FG
Sbjct: 71 SSKSPSPPSAKMS---KRPNGPYSVRKYQPRGSPPSDGSDKIHRFG 113
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 452 SAVVPSPRSTTKSSFIKAPLLPAPVRNHYPRSSPKNEEQTLVYVFG 589
S+ PSP S S K P P VR + PR SP ++ ++ FG
Sbjct: 71 SSKSPSPPSAKMS---KRPNGPYSVRKYQPRGSPPSDGSDKIHRFG 113
>AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical
protein H24G06.1d protein.
Length = 669
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 468 PPEALQNHLSLRPH--SFPHRFATIIPAQAPKTKSRPLSTCLVQE 596
PP+ Q+ R H S+P +T P AP+T SR LST Q+
Sbjct: 82 PPQT-QHQYGYRDHGTSYPMPDSTHPPPLAPRTTSRVLSTAPSQQ 125
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 468 PPEALQNHLSLRPH--SFPHRFATIIPAQAPKTKSRPLSTCLVQE 596
PP+ Q+ R H S+P +T P AP+T SR LST Q+
Sbjct: 1014 PPQT-QHQYGYRDHGTSYPMPDSTHPPPLAPRTTSRVLSTAPSQQ 1057
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 468 PPEALQNHLSLRPH--SFPHRFATIIPAQAPKTKSRPLSTCLVQE 596
PP+ Q+ R H S+P +T P AP+T SR LST Q+
Sbjct: 1014 PPQT-QHQYGYRDHGTSYPMPDSTHPPPLAPRTTSRVLSTAPSQQ 1057
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,455,734
Number of Sequences: 27780
Number of extensions: 143561
Number of successful extensions: 471
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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