Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30742
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 147 4e-36
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 147 4e-36
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 147 4e-36
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 145 2e-35
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 129 2e-30
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 127 6e-30
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 121 4e-28
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 121 4e-28
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 120 7e-28
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 120 7e-28
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 120 1e-27
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 120 1e-27
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 107 4e-24
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 93 1e-19
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 93 2e-19
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 61 6e-10
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 61 6e-10
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 61 6e-10
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 61 6e-10
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 61 6e-10
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 58 3e-09
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 54 5e-08
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 54 5e-08
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 35 0.047
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 35 0.047
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 4.1
Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z68116-2|CAA92173.1| 243|Caenorhabditis elegans Hypothetical pr... 27 7.2
U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical p... 27 7.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 147 bits (357), Expect = 4e-36
Identities = 74/149 (49%), Positives = 89/149 (59%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P S F L+ ++ GHYTIGKEI+DL
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+FH GGTGSG
Sbjct: 121 RIRRLA-DNCTGLQGFLVFHSFGGGTGSG 148
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 147 bits (357), Expect = 4e-36
Identities = 74/149 (49%), Positives = 89/149 (59%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P S F L+ ++ GHYTIGKEI+DL
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+FH GGTGSG
Sbjct: 121 RIRRLA-DNCTGLQGFLVFHSFGGGTGSG 148
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 147 bits (357), Expect = 4e-36
Identities = 74/149 (49%), Positives = 89/149 (59%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P S F L+ ++ GHYTIGKEI+DL
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+FH GGTGSG
Sbjct: 121 RIRRLA-DNCTGLQGFLVFHSFGGGTGSG 148
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 145 bits (352), Expect = 2e-35
Identities = 73/148 (49%), Positives = 88/148 (59%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFGQ 443
P S F L+ ++ GHYTIGKEI+DL +
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 444 NPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + FL+FH GGTGSG
Sbjct: 121 IRRLA-DNCTGLQGFLVFHSFGGGTGSG 147
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 129 bits (311), Expect = 2e-30
Identities = 68/150 (45%), Positives = 83/150 (55%)
Frame = +3
Query: 78 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAA 257
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET A
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 258 STYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGF 437
P + F LL ++ GHYTIGKEI+D+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 438 GQNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ R + FL+FH GGTGSG
Sbjct: 125 -DRVRRLVENCRGLQGFLVFHSFGGGTGSG 153
Score = 98.7 bits (235), Expect = 3e-21
Identities = 59/118 (50%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSL 403
F F + KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARG
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG-- 111
Query: 404 HHWKGNRRFGFWTESASSLTSVPVCKGFPD-LPLPSWRYRLW-GSLP*LMERLSGDYG 571
H+ G + L V C+G L S+ G LMERLS DYG
Sbjct: 112 HYTIGKEIIDVVMDRVRRL--VENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYG 167
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 127 bits (306), Expect = 6e-30
Identities = 66/149 (44%), Positives = 82/149 (55%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F L+ ++ GHYTIGKE++D+
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + +S + FLIFH GGTGSG
Sbjct: 121 RVRRLT-ERCQSLQGFLIFHSFGGGTGSG 148
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 121 bits (291), Expect = 4e-28
Identities = 64/149 (42%), Positives = 79/149 (53%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F ++ ++ GHYT+GKE++D
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + F +FH GGTGSG
Sbjct: 119 RIRRLA-DNCSGLQGFFVFHSFGGGTGSG 146
Score = 96.3 bits (229), Expect = 1e-20
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 121 bits (291), Expect = 4e-28
Identities = 64/149 (42%), Positives = 79/149 (53%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F ++ ++ GHYT+GKE++D
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + F +FH GGTGSG
Sbjct: 119 RIRRLA-DNCSGLQGFFVFHSFGGGTGSG 146
Score = 96.3 bits (229), Expect = 1e-20
Identities = 42/58 (72%), Positives = 50/58 (86%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 120 bits (289), Expect = 7e-28
Identities = 63/149 (42%), Positives = 80/149 (53%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P + F ++ ++ GHYT+GKE++D
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + F +FH GGTGSG
Sbjct: 119 RIRRLA-DNCSGLQGFFVFHSFGGGTGSG 146
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARG
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARG 104
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 120 bits (289), Expect = 7e-28
Identities = 63/149 (42%), Positives = 80/149 (53%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P + F ++ ++ GHYT+GKE++D
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + F +FH GGTGSG
Sbjct: 119 RIRRLA-DNCSGLQGFFVFHSFGGGTGSG 146
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARG
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARG 104
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 120 bits (288), Expect = 1e-27
Identities = 63/149 (42%), Positives = 79/149 (53%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F ++ ++ GHYT+GKE++D
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + F +FH GGTGSG
Sbjct: 119 RIRRLA-DNCSGLQGFFVFHSFGGGTGSG 146
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 120 bits (288), Expect = 1e-27
Identities = 63/149 (42%), Positives = 79/149 (53%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F ++ ++ GHYT+GKE++D
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + F +FH GGTGSG
Sbjct: 119 RIRRLA-DNCSGLQGFFVFHSFGGGTGSG 146
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 109 bits (261), Expect = 2e-24
Identities = 60/148 (40%), Positives = 75/148 (50%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFGQ 443
P S F LL ++ G YTIG+E++D+ +
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 444 NPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F+IFH GGTGSG
Sbjct: 128 VKRLA-ENCNGLQGFVIFHSFGGGTGSG 154
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG
Sbjct: 66 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARG 112
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 107 bits (258), Expect = 4e-24
Identities = 61/149 (40%), Positives = 72/149 (48%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +L ++ GHYT+GKEI+D
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + F +FH GGTGSG
Sbjct: 118 RIRRLA-NNCEGLQGFFVFHSFGGGTGSG 145
Score = 93.9 bits (223), Expect = 7e-20
Identities = 38/47 (80%), Positives = 46/47 (97%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARG
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARG 103
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 93.5 bits (222), Expect = 1e-19
Identities = 50/148 (33%), Positives = 72/148 (48%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFGQ 443
P + F + ++ ++ GHYTIGKE++D+
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVL-D 123
Query: 444 NPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+FH GGTGSG
Sbjct: 124 RIRKQTENCEGLQGFLVFHSFGGGTGSG 151
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +2
Query: 227 QHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
Q F + KHVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARG
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG 109
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG
Sbjct: 38 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARG 84
Score = 65.3 bits (152), Expect = 3e-11
Identities = 40/127 (31%), Positives = 55/127 (43%)
Frame = +3
Query: 147 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYPVXXXXXXXXXXXXXXXXAH 326
++CLEHGIQPDG D T ++ NTFF+ET P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 327 TDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFGQNPQAR*PVYRSAKDFLIFHFL 506
S F LL ++ G YTIG+E++D+ + + + F+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLA-ENCNGLQGFVIFHSF 119
Query: 507 RGGTGSG 527
GGTGSG
Sbjct: 120 GGGTGSG 126
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 55.6 bits (128), Expect = 2e-08
Identities = 41/149 (27%), Positives = 58/149 (38%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E+VD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD-NVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSG 146
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 57.2 bits (132), Expect = 8e-09
Identities = 42/149 (28%), Positives = 57/149 (38%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E+VD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD-NVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAEGCDCLQGFQLTHSLGGGTGSG 146
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 55.2 bits (127), Expect = 3e-08
Identities = 41/149 (27%), Positives = 58/149 (38%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E+VD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD-NVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSG 146
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2
Query: 251 SCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG--HYTEG 109
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/149 (28%), Positives = 59/149 (39%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E+VD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD-NVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSG 146
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +2
Query: 251 SCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG--HYTEG 109
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/149 (28%), Positives = 59/149 (39%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E+VD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD-NVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSG 146
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 58.4 bits (135), Expect = 3e-09
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
K+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 58 KYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 53.2 bits (122), Expect = 1e-07
Identities = 40/149 (26%), Positives = 55/149 (36%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E+VD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD-NVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAESCDCLQGFQMTHSLGGGTGSG 146
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 54.4 bits (125), Expect = 5e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
Score = 52.8 bits (121), Expect = 2e-07
Identities = 42/149 (28%), Positives = 54/149 (36%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F N + G+Y G EIVD
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ S + F + H L GGTGSG
Sbjct: 119 VIRREA-EAADSLEGFQLIHSLGGGTGSG 146
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 54.4 bits (125), Expect = 5e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 397
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
Score = 52.8 bits (121), Expect = 2e-07
Identities = 42/149 (28%), Positives = 54/149 (36%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F N + G+Y G EIVD
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ S + F + H L GGTGSG
Sbjct: 119 VIRREA-EAADSLEGFQLIHSLGGGTGSG 146
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.047
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 93 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 185
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARG 397
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.047
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 93 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 185
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
Score = 34.3 bits (75), Expect = 0.063
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARG 397
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 370 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 275
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical
protein F21D9.5 protein.
Length = 839
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 467 HWSASLRILSKTQIYDFLSNGVVTHGHSCWPHLPYQ 360
HW L + I+ FLSNG +T + W + YQ
Sbjct: 747 HWMMGLTSQNVKYIFTFLSNG-ITDEKALWNGIEYQ 781
>Z68116-2|CAA92173.1| 243|Caenorhabditis elegans Hypothetical
protein F42F12.3 protein.
Length = 243
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 435 FGQNPQAR*PVYRSAKDFLIFHFLRGGTGSGGHFLN 542
+G NP+ + S F+ F+FL GG S G LN
Sbjct: 40 WGINPKLAWFIQESPAFFIPFYFLFGGLSSTGRILN 75
>U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical
protein F52E1.10 protein.
Length = 451
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 260 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFGFW 439
H+ F D++ V D V T +L Q++T ++ N +GSLH ++ FW
Sbjct: 300 HLENRKFTDVD-LVEDMVYLQT--ELKKVVQVLTSFDEYENELRQGSLHWSPAHKCEVFW 356
Query: 440 TESASSL 460
E+A L
Sbjct: 357 NENAHRL 363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,329,311
Number of Sequences: 27780
Number of extensions: 323721
Number of successful extensions: 966
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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