Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30742
(571 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.53
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 2.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.8
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 2.8
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 4.9
AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced prot... 22 4.9
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 6.5
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 6.5
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 6.5
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 21 6.5
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.0 bits (52), Expect = 0.53
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 375 RPTTMPVGHYTIGKEIVDLGFGQNP 449
R T PV T+ +V+L G NP
Sbjct: 901 RLVTFPVWQVTLNARLVELSLGSNP 925
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 144 PSRHYRSGLR 115
P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 207 RWSCLWASGHQAGCRAPGSKAPSRHYR 127
RW C W+ G C+A A SR R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 207 RWSCLWASGHQAGCRAPGSKAPSRHYR 127
RW C W+ G C+A A SR R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 207 RWSCLWASGHQAGCRAPGSKAPSRHYR 127
RW C W+ G C+A A SR R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 236 LQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQL 337
L+ R+ H+ + D+EPTV RQL
Sbjct: 234 LEERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 513 LHEGSGRSGNPLQTGTL 463
L EG+GRS NP G+L
Sbjct: 381 LIEGTGRSVNPRYYGSL 397
>AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced protein
75 protein.
Length = 36
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 178 MARCPQTRPSGVETILSTLSSARPE 252
+A+ P + T+ ST+SSA+PE
Sbjct: 7 VAQLPHHLSPNMPTMDSTVSSAKPE 31
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 189 PTDKTIGGGDDSFNTFFSETGAAST 263
PT+ TIGGG + + + + AA+T
Sbjct: 279 PTEVTIGGGGTTSSRRTTGSRAAAT 303
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 189 PTDKTIGGGDDSFNTFFSETGAAST 263
PT+ TIGGG + + + + AA+T
Sbjct: 279 PTEVTIGGGGTTSSRRTTGSRAAAT 303
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 189 PTDKTIGGGDDSFNTFFSETGAAST 263
PT+ TIGGG + + + + AA+T
Sbjct: 279 PTEVTIGGGGTTSSRRTTGSRAAAT 303
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 360 LVRKMRPTTMPVGHYTIGKEIV 425
++ K TMP IGKEIV
Sbjct: 88 MIVKQLEITMPPEEVVIGKEIV 109
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,262
Number of Sequences: 438
Number of extensions: 4083
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -