Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30742
(571 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 153 6e-38
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 153 6e-38
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 152 1e-37
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 152 1e-37
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 134 3e-32
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 134 3e-32
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 127 4e-30
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 62 3e-10
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 60 8e-10
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 59 2e-09
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 59 2e-09
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 58 5e-09
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 58 5e-09
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 58 5e-09
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 58 5e-09
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 57 7e-09
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 48 6e-06
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 48 6e-06
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 30 0.95
At4g39753.1 68417.m05629 kelch repeat-containing F-box family pr... 29 1.7
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 3.8
At5g20060.2 68418.m02389 phospholipase/carboxylesterase family p... 28 5.0
At5g20060.1 68418.m02388 phospholipase/carboxylesterase family p... 28 5.0
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 8.8
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 8.8
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 8.8
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 8.8
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 8.8
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 27 8.8
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 153 bits (372), Expect = 6e-38
Identities = 75/149 (50%), Positives = 91/149 (61%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F L+ ++ GHYTIGKEIVDL
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+F+ + GGTGSG
Sbjct: 121 RIRKLA-DNCTGLQGFLVFNAVGGGTGSG 148
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 153 bits (372), Expect = 6e-38
Identities = 75/149 (50%), Positives = 91/149 (61%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F L+ ++ GHYTIGKEIVDL
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+F+ + GGTGSG
Sbjct: 121 RIRKLA-DNCTGLQGFLVFNAVGGGTGSG 148
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 152 bits (369), Expect = 1e-37
Identities = 75/149 (50%), Positives = 90/149 (60%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F L+ ++ GHYTIGKEIVDL
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+F+ + GGTGSG
Sbjct: 121 RIRKLA-DNCTGLQGFLVFNAVGGGTGSG 148
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 152 bits (369), Expect = 1e-37
Identities = 75/149 (50%), Positives = 90/149 (60%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F L+ ++ GHYTIGKEIVDL
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+F+ + GGTGSG
Sbjct: 121 RIRKLA-DNCTGLQGFLVFNAVGGGTGSG 148
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 134 bits (325), Expect = 3e-32
Identities = 67/149 (44%), Positives = 85/149 (57%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F L+ ++ GHYT+GKEIVDL
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+F+ + GGTGSG
Sbjct: 121 RVRKLA-DNCTGLQGFLVFNAVGGGTGSG 148
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 134 bits (325), Expect = 3e-32
Identities = 67/149 (44%), Positives = 85/149 (57%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F L+ ++ GHYT+GKEIVDL
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+F+ + GGTGSG
Sbjct: 121 RVRKLA-DNCTGLQGFLVFNAVGGGTGSG 148
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 127 bits (307), Expect = 4e-30
Identities = 63/149 (42%), Positives = 83/149 (55%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F L+ ++ GHYT+G+EIVD
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCL- 119
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + + FL+F+ + GGTGSG
Sbjct: 120 ERLRKLADNCTGLQGFLVFNAVGGGTGSG 148
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
+ SC ++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 53 EASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 3/152 (1%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 251
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 252 AASTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDL 431
P F +N + + GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 432 GFGQNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 116 VL-DVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 60.5 bits (140), Expect = 8e-10
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
+ SC ++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 53 EASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 52.0 bits (119), Expect = 3e-07
Identities = 39/149 (26%), Positives = 57/149 (38%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E++D
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID-SVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
+ SC + VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 52.4 bits (120), Expect = 2e-07
Identities = 38/149 (25%), Positives = 56/149 (37%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E++D
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID-SVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 58.8 bits (136), Expect = 2e-09
Identities = 24/54 (44%), Positives = 38/54 (70%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG--HYTEG 110
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/149 (26%), Positives = 58/149 (38%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E++D
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL- 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 147
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 57.6 bits (133), Expect = 5e-09
Identities = 40/149 (26%), Positives = 57/149 (38%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E++D
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELID-SVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
+ SC + VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+G H+ +G
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKG--HYTEG 109
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 57.6 bits (133), Expect = 5e-09
Identities = 40/149 (26%), Positives = 57/149 (38%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E++D
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELID-SVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
+ SC + VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+G H+ +G
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKG--HYTEG 109
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 57.6 bits (133), Expect = 5e-09
Identities = 24/54 (44%), Positives = 38/54 (70%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
K+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 53.6 bits (123), Expect = 9e-08
Identities = 40/149 (26%), Positives = 56/149 (37%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E++D
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID-SVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAENSDCLQGFQVCHSLGGGTGSG 146
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 57.6 bits (133), Expect = 5e-09
Identities = 24/54 (44%), Positives = 38/54 (70%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
K+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 55.2 bits (127), Expect = 3e-08
Identities = 41/149 (27%), Positives = 56/149 (37%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E++D
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID-SVL 117
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 57.2 bits (132), Expect = 7e-09
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 418
++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+G H+ +G
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKG--HYTEG 110
Score = 54.8 bits (126), Expect = 4e-08
Identities = 40/149 (26%), Positives = 57/149 (38%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRPTTMPVGHYTIGKEIVDLGFG 440
P F +N + + GHYT G E++D
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL- 118
Query: 441 QNPQAR*PVYRSAKDFLIFHFLRGGTGSG 527
+ + F + H L GGTGSG
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGGGTGSG 147
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 47.6 bits (108), Expect = 6e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 239
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGSLH 406
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G H
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YH 109
Query: 407 HWKG 418
KG
Sbjct: 110 QGKG 113
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 47.6 bits (108), Expect = 6e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 239
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGSLH 406
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G H
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YH 109
Query: 407 HWKG 418
KG
Sbjct: 110 QGKG 113
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -1
Query: 256 AAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 125
A PVS L +SPP +W SGW P +PI
Sbjct: 99 APPVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At4g39753.1 68417.m05629 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 390
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 473 VCKGFPDLPLPSWRYRLW 526
VC PD PLPSW Y LW
Sbjct: 90 VCLKLPDRPLPSW-YTLW 106
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 304 NNSRFKIDEDSTGYVLAAPVSLKKVLKESSPPPM 203
N R K S+ L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At5g20060.2 68418.m02389 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -1
Query: 343 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLAAPVSLKKVL-------KESSPPPMVLSV 191
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 190 GIWPSGWMPCSR 155
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At5g20060.1 68418.m02388 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -1
Query: 343 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLAAPVSLKKVL-------KESSPPPMVLSV 191
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 190 GIWPSGWMPCSR 155
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 245 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 75
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 245 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 75
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 245 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 75
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 245 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 75
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 192 WASGHQAGCRAPGSKAPSRHYRSGLR 115
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 319 SADLINNSRFKIDEDSTGYVLAAPVSLKKVLKESSPPP 206
SA++ N RFK + T AA +++ V+ + +PPP
Sbjct: 764 SAEVTNYDRFKSGFEETEKDSAATPTVEPVVDDGAPPP 801
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,695,672
Number of Sequences: 28952
Number of extensions: 308899
Number of successful extensions: 1087
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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