Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30739
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 118 6e-27
03_01_0034 + 318432-318825,318902-319851 117 8e-27
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 116 1e-26
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 116 2e-26
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 114 7e-26
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 114 7e-26
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 113 9e-26
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 110 9e-25
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 50 2e-06
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 50 2e-06
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 50 2e-06
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 50 2e-06
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 29 2.6
02_05_1127 + 34292894-34293284,34293948-34295443 29 2.6
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 6.0
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 28 8.0
07_03_0251 + 15831712-15832127,15832203-15832344,15832692-158330... 28 8.0
03_01_0235 - 1842909-1843498,1844380-1844569 28 8.0
02_05_1360 + 35942493-35942682,35942799-35942858,35943099-359432... 28 8.0
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 118 bits (283), Expect = 6e-27
Identities = 50/58 (86%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPPRGLKMAATF+GNST+IQE+F+R+
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRV 381
Score = 116 bits (278), Expect = 2e-26
Identities = 67/136 (49%), Positives = 84/136 (61%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMM A DPRHGRYLT +A+FRG+MS K ++++L ++ + + +
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTK--------EVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFT 336
S D G + + ++Q EQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLV+EYQQY
Sbjct: 410 EAESNMNDLVAEYQQY 425
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 117 bits (282), Expect = 8e-27
Identities = 68/136 (50%), Positives = 84/136 (61%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMM A DPRHGRYLT +A+FRG+MS K ++++L ++ + + +
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTK--------EVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFT 336
S D G + + ++Q EQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
Score = 114 bits (274), Expect = 7e-26
Identities = 49/58 (84%), Positives = 56/58 (96%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRV 381
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 116 bits (280), Expect = 1e-26
Identities = 67/136 (49%), Positives = 85/136 (62%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQRED---RRV 171
NMM A DPRHGRYLT +A+FRG+MS K ++++L ++ + + V
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTK--------EVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 172 RHS-SSWSQDGRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFT 336
+ S +G + + ++Q EQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLV+EYQQY
Sbjct: 410 EAESNMNDLVAEYQQY 425
Score = 115 bits (276), Expect = 4e-26
Identities = 49/58 (84%), Positives = 57/58 (98%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRV 381
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 116 bits (278), Expect = 2e-26
Identities = 67/136 (49%), Positives = 84/136 (61%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMM A DPRHGRYLT +A+FRG+MS K ++++L ++ + + +
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTK--------EVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFT 336
S D G + + ++Q EQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLV+EYQQY
Sbjct: 410 EAESNMNDLVAEYQQY 425
Score = 113 bits (273), Expect = 9e-26
Identities = 49/58 (84%), Positives = 57/58 (98%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKMA+TFIGNST+IQE+F+R+
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRV 381
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 114 bits (274), Expect = 7e-26
Identities = 48/58 (82%), Positives = 57/58 (98%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+
Sbjct: 345 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRV 402
Score = 104 bits (249), Expect = 8e-23
Identities = 61/136 (44%), Positives = 80/136 (58%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMM A DPRHGRYLT +A+FRG+MS K +++++ ++ + + +
Sbjct: 319 NMMCAADPRHGRYLTASAMFRGKMSTK--------EVDEQMINVQNKNSSYFVEWIPNNV 370
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHLEQFTAMF----RRKAFLHWYTGEGMDEMEFT 336
S D G + + ++Q + + F RRKAFLHWYTGEGMDEMEFT
Sbjct: 371 KSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 430
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 431 EAESNMNDLVSEYQQY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 114 bits (274), Expect = 7e-26
Identities = 48/58 (82%), Positives = 57/58 (98%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TFIGNST+IQE+F+R+
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRV 381
Score = 104 bits (249), Expect = 8e-23
Identities = 61/136 (44%), Positives = 80/136 (58%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMM A DPRHGRYLT +A+FRG+MS K +++++ ++ + + +
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTK--------EVDEQMINVQNKNSSYFVEWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHLEQFTAMF----RRKAFLHWYTGEGMDEMEFT 336
S D G + + ++Q + + F RRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 113 bits (273), Expect = 9e-26
Identities = 47/58 (81%), Positives = 57/58 (98%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL MA+TF+GNST+IQE+F+R+
Sbjct: 504 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRV 561
Score = 104 bits (249), Expect = 8e-23
Identities = 61/136 (44%), Positives = 80/136 (58%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMM A DPRHGRYLT +A+FRG+MS K +++++ ++ + + +
Sbjct: 478 NMMCAADPRHGRYLTASAMFRGKMSTK--------EVDEQMINVQNKNSSYFVEWIPNNV 529
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHLEQFTAMF----RRKAFLHWYTGEGMDEMEFT 336
S D G + + ++Q + + F RRKAFLHWYTGEGMDEMEFT
Sbjct: 530 KSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 589
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 590 EAESNMNDLVSEYQQY 605
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 110 bits (265), Expect = 9e-25
Identities = 46/58 (79%), Positives = 56/58 (96%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GL MA+TF+GNST+IQE+F+R+
Sbjct: 340 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRV 397
Score = 105 bits (251), Expect = 4e-23
Identities = 66/135 (48%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQRE--DRRVR 174
NMM A DPRHGRYLT +A+FR GR + EQ + + E V+
Sbjct: 314 NMMCAADPRHGRYLTASAMFR-------GRMSTKEVDEQMINVQNKNSSYFVEWIPNNVK 366
Query: 175 HS-SSWSQDGRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFTE 339
S G + + ++Q EQFTAMFRRKAFLHWYT EGMDEMEFTE
Sbjct: 367 SSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTE 426
Query: 340 AESNMNDLVSEYQQY 384
AESNMNDLV+EYQQY
Sbjct: 427 AESNMNDLVAEYQQY 441
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 35.9 bits (79), Expect = 0.030
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
+MMA CDPRHG+Y+ ++RG
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRG 321
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A I NST++
Sbjct: 326 KDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVV 385
Query: 236 ELFKRI 253
E+F RI
Sbjct: 386 EVFSRI 391
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 35.9 bits (79), Expect = 0.030
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
+MMA CDPRHG+Y+ ++RG
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRG 321
Score = 35.1 bits (77), Expect = 0.053
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A I N+TA+
Sbjct: 326 KDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVA 385
Query: 236 ELFKRI 253
E+F RI
Sbjct: 386 EVFSRI 391
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 35.9 bits (79), Expect = 0.030
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
+MMA CDPRHG+Y+ ++RG
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRG 321
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A I NST++
Sbjct: 326 KDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVV 385
Query: 236 ELFKRI 253
E+F RI
Sbjct: 386 EVFSRI 391
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDR-RVRH 177
++MA CDPRHG+Y+ ++RG + K A H + ++ +D + + +
Sbjct: 381 SVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV--HSIKTRRTVQFVDWCPTGFKCGINY 438
Query: 178 SSSWSQDGRHLHRKLHRHPGAVQ---AHLEQFTAMFRR-------KAFLHWYTGEGMDEM 327
+ G L K+ R + A E F+ + R+ +AF+HWY GEGM+E
Sbjct: 439 QPPTAVPGGDL-AKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEG 497
Query: 328 EFTEAESNMNDLVSEYQQ 381
EF+EA ++ L +Y++
Sbjct: 498 EFSEAREDLAALEKDYEE 515
Score = 34.7 bits (76), Expect = 0.070
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG--------LKMAATFIGNSTAIQ 235
K+V+ + +I+ + + FV+W P K + PP ++ A I N+TA+
Sbjct: 407 KDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVA 466
Query: 236 ELFKRI 253
E+F RI
Sbjct: 467 EVFSRI 472
>03_05_1014 -
29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 594 CSV*KSLESMSSILTLYRNHLRLLKQNVTCINGIH 490
CSV K LES S++ +Y++ +L N+T + +H
Sbjct: 216 CSVAKELESTSTMNAVYQDKTNILFSNITNRDNLH 250
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 421 RQTLRPRRRWPPGTVGTQRQG 359
R T +P+RRWPPG+ G +G
Sbjct: 83 RATGQPKRRWPPGSSGGGARG 103
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 347 LSASVNSISSMPSPVYQCKKALRLNIAVN 261
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>08_02_1050 +
23949828-23949981,23950083-23950534,23951599-23951631,
23952069-23952179,23953175-23953348
Length = 307
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 493 PLRL*SERLARCGFNALQSPAPALRQTLRPRRRWPP 386
PLR + C SP+P+ + P RRWPP
Sbjct: 9 PLRSRAHLRLHCRLPPSPSPSPSPLLSRAPSRRWPP 44
>07_03_0251 +
15831712-15832127,15832203-15832344,15832692-15833056,
15833134-15833293,15833699-15834036,15834138-15834315,
15834454-15834987,15835176-15836291
Length = 1082
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 664 WNQNWGFRFKINLVNNPGSFKSWLFCLKKFRKH 566
W Q +G ++L NP S K W KF H
Sbjct: 460 WVQEYGRERYVSLAKNPASDKQWTHLKGKFLLH 492
>03_01_0235 - 1842909-1843498,1844380-1844569
Length = 259
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 85 GRRANA*HPEQELLILRGMDPQQREDRRVRHSSSWSQDGRHLHRKLHRHPG 237
GRR P+ L+++ G QQ+++RR R + SQ+GR + H H G
Sbjct: 123 GRRPRQRLPDPVLILVGGAVRQQQQERR-RWRTKGSQEGR---SRRHGHGG 169
>02_05_1360 +
35942493-35942682,35942799-35942858,35943099-35943217,
35945405-35945449,35945598-35945676,35945777-35945838,
35945932-35946037,35946193-35946253,35947097-35947167,
35947459-35947598,35947887-35947994
Length = 346
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 312 LAGVPMQESLAPEHSGELFQMRLNSSWMAVEFPMKVAAILRPRGGMSHTAV 160
LAG+P+ +PE E+ + R+N + V + + RP +S TA+
Sbjct: 111 LAGMPISTRWSPEIKKEIKESRINVTSKVVNYINNASGDARPSVFVSATAI 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,923,743
Number of Sequences: 37544
Number of extensions: 321049
Number of successful extensions: 1065
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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