Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30739
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 128 3e-30
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 128 3e-30
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 122 3e-28
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 107 8e-24
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 107 8e-24
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 81 6e-16
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 79 3e-15
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 59 4e-09
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 56 3e-08
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 56 4e-08
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 50 2e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 50 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 50 2e-06
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 50 2e-06
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 50 2e-06
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 50 2e-06
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 35 0.071
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.071
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 34 0.094
SB_29103| Best HMM Match : APC10 (HMM E-Value=0.00051) 30 1.5
SB_16716| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25959| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 28 6.2
SB_43681| Best HMM Match : MAM (HMM E-Value=2.5e-20) 28 8.1
SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018) 28 8.1
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 128 bits (310), Expect = 3e-30
Identities = 74/136 (54%), Positives = 88/136 (64%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMMAACDPRHGRYLTVAA+FRGRMSMK ++++L ++ + + +
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMK--------EVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFT 336
+ D G + + A+Q EQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
Score = 123 bits (297), Expect = 1e-28
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRI
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRI 381
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 128 bits (310), Expect = 3e-30
Identities = 74/136 (54%), Positives = 88/136 (64%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMMAACDPRHGRYLTVAA+FRGRMSMK ++++L ++ + + +
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMK--------EVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFT 336
+ D G + + A+Q EQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
Score = 123 bits (297), Expect = 1e-28
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRI
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRI 381
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 122 bits (294), Expect = 3e-28
Identities = 55/58 (94%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KE+DEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRI
Sbjct: 269 KELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRI 326
Score = 113 bits (273), Expect = 1e-25
Identities = 72/135 (53%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQRE--DRRVR 174
NMMAACDP HGRYLTVAA+FR GR + EQ L + E V+
Sbjct: 243 NMMAACDPLHGRYLTVAAMFR-------GRMSMKELDEQMLNVQNKNSSYFVEWIPNNVK 295
Query: 175 HS-SSWSQDGRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFTE 339
+ G + + A+Q EQFTAMFRRKAFLHWYTGEGMDEMEFTE
Sbjct: 296 TAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 355
Query: 340 AESNMNDLVSEYQQY 384
AESNMNDLVSEYQQY
Sbjct: 356 AESNMNDLVSEYQQY 370
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 107 bits (257), Expect = 8e-24
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = +2
Query: 86 VDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
VDEQMLN QNKNS +FVEWIPNNVKT VCDI P+GLKMAATF+GN+TAIQELFKR+
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRV 146
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +1
Query: 256 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 384
EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 148 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 190
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 107 bits (257), Expect = 8e-24
Identities = 47/56 (83%), Positives = 52/56 (92%)
Frame = +2
Query: 86 VDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
VDEQMLN QNKNS +FVEWIPNNVKT VCDI P+GLKMAATF+GN+TAIQELFKR+
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRV 208
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = +1
Query: 256 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 384
EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 210 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 252
Score = 57.6 bits (133), Expect = 9e-09
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMK 81
NMM ACDPRHGRYLTVAAIFRG+MSM+
Sbjct: 42 NMMTACDPRHGRYLTVAAIFRGKMSMR 68
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEV++QM Q++ SS FV+WIPNN K AVCD+PP +KM+A+ I ++TAIQELFKRI
Sbjct: 229 KEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPHDMKMSASCISSNTAIQELFKRI 286
Score = 77.0 bits (181), Expect = 1e-14
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVR-- 174
N++ AC+P+ G+YLT AA++RG MSMK A ++ + P +
Sbjct: 203 NLLIACNPKRGKYLTYAAMYRGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVP 262
Query: 175 -HSSSWSQDGRHLHRKLHRHPGAVQAHLEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 351
H S + + ++ H + MFRR+AFLHWYT EGMD +F EA+++
Sbjct: 263 PHDMKMSASCISSNTAIQELFKRIRLH---YKLMFRRRAFLHWYTEEGMDSQQFEEADND 319
Query: 352 MNDLVSEYQQ 381
+ DL+S YQQ
Sbjct: 320 ILDLISTYQQ 329
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/47 (74%), Positives = 41/47 (87%)
Frame = +2
Query: 110 QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKR 250
Q+ +SS FVEWIPNN+KTAVCD+PP GLK AATF+ NSTAIQE F+R
Sbjct: 153 QDSHSSSFVEWIPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRR 199
Score = 58.8 bits (136), Expect(2) = 6e-13
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1
Query: 238 AVQAHLEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 351
A + EQF AMFRR+AFLHWYT EGMD +EFTE + N
Sbjct: 196 AFRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
Score = 32.7 bits (71), Expect(2) = 6e-13
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 331 FTEAESNMNDLVSEYQQY 384
+ A+SN+NDL+SEYQQY
Sbjct: 256 YFSADSNLNDLISEYQQY 273
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 58.8 bits (136), Expect = 4e-09
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
N M CDPRHG+Y+ ++RG + K A A + P + +
Sbjct: 225 NQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVG-INSQ 283
Query: 181 SSWSQDGRHLHRKLHRHPGAVQAHLE-QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 357
G L + + A L+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 284 PPTVVPGGDLAKPI----AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 339
Query: 358 DLVSEYQQ 381
L +Y++
Sbjct: 340 ALEKDYEE 347
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 56.0 bits (129), Expect = 3e-08
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
N M CDPRHG+Y+ ++RG + K A A + + P + + +
Sbjct: 98 NQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG-INYQ 156
Query: 181 SSWSQDGRHLHRKLHR------HPGAVQ---AHLE-QFTAMFRRKAFLHWYTGEGMDEME 330
+ G L K+ R + A+ A L +F M+ ++AF+HWY GEGM+E E
Sbjct: 157 QPTAVPGGDL-AKVQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGE 215
Query: 331 FTEAESNMNDLVSEYQQ 381
F+EA ++ L +Y++
Sbjct: 216 FSEAREDLAALEKDYEE 232
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 55.6 bits (128), Expect = 4e-08
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
N M CDPRHG+Y+ ++RG + K A A ++ + P + + +
Sbjct: 671 NQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVG-INYQ 729
Query: 181 SSWSQDGRHLHRKLHR------HPGAVQ---AHLE-QFTAMFRRKAFLHWYTGEGMDEME 330
G L K+ R + A+ A L+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 730 PPTVVPGGDL-AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 788
Query: 331 FTEAESNMNDLVSEYQQ 381
F+EA ++ L +Y++
Sbjct: 789 FSEAREDLAALEKDYEE 805
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 1174 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1214
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 697 KDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 756
Query: 236 ELFKRI 253
E + R+
Sbjct: 757 EAWARL 762
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +2
Query: 83 EVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQE 238
+V+ + I+ K + FV+W P K + PP ++ A + N+TAI E
Sbjct: 1107 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 1166
Query: 239 LFKRI 253
+ R+
Sbjct: 1167 AWARL 1171
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 55.6 bits (128), Expect = 4e-08
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 10/137 (7%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
N M CDPRHG+Y+ ++RG + K A A + + P + + +
Sbjct: 300 NQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG-INYQ 358
Query: 181 SSWSQDGRHLHRKLHR------HPGAVQ---AHLE-QFTAMFRRKAFLHWYTGEGMDEME 330
G L K+ R + AV A L+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 359 PPTVVPGGDL-AKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 331 FTEAESNMNDLVSEYQQ 381
F+EA ++ L +Y++
Sbjct: 418 FSEAREDLAALEKDYEE 434
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 827 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 867
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 733 NQMVKCDPRHGKYMACCLLYRG 754
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 759 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 818
Query: 236 ELFKRI 253
E + R+
Sbjct: 819 EAWARL 824
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TA+
Sbjct: 326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVA 385
Query: 236 ELFKRI 253
E + R+
Sbjct: 386 EAWARL 391
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 310 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 369
Query: 236 ELFKRI 253
E + R+
Sbjct: 370 EAWARL 375
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 92 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 546 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 586
Score = 32.3 bits (70), Expect = 0.38
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPR+G+Y+ ++RG
Sbjct: 431 NQMVKCDPRYGKYMACCLLYRG 452
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 331 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 371
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 237 NQMVKCDPRHGKYMACCMLYRG 258
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 263 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 322
Query: 236 ELFKRI 253
E + R+
Sbjct: 323 EAWARL 328
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 300 NQMVKCDPRHGKYMACCLLYRG 321
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 326 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
Query: 236 ELFKRI 253
E + R+
Sbjct: 386 EAWARL 391
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 810 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 850
Score = 35.9 bits (79), Expect = 0.031
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ +FRG
Sbjct: 285 NQMVKCDPRHGKYMACCLLFRG 306
Score = 35.9 bits (79), Expect = 0.031
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ +FRG
Sbjct: 716 NQMVKCDPRHGKYMACCLLFRG 737
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 311 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 370
Query: 236 ELFKRI 253
E + R+
Sbjct: 371 EAWARL 376
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 742 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 801
Query: 236 ELFKRI 253
E + R+
Sbjct: 802 EAWARL 807
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 359 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 399
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 265 NQMVKCDPRHGKYMACCLLYRG 286
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 291 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 350
Query: 236 ELFKRI 253
E + R+
Sbjct: 351 EAWARL 356
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 979 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1019
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 364 NQMVKCDPRHGKYMACCMLYRG 385
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 885 NQMVKCDPRHGKYMACCLLYRG 906
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 911 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 970
Query: 236 ELFKRI 253
E + R+
Sbjct: 971 EAWARL 976
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 184
K+V+ + I+ K + FV+W P K + PP
Sbjct: 390 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 424
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 319 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 359
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 225 NQMVKCDPRHGKYMACCMLYRG 246
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 251 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 310
Query: 236 ELFKRI 253
E + R+
Sbjct: 311 EAWARL 316
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 192 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 98 NQMVKCDPRHGKYMACCMLYRG 119
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 124 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 183
Query: 236 ELFKRI 253
E + R+
Sbjct: 184 EAWARL 189
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 300 NQMVKCDPRHGKYMACCLLYRG 321
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP ++ A + N+TAI
Sbjct: 326 KDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 385
Query: 236 ELFKRI 253
E + R+
Sbjct: 386 EAWARL 391
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +1
Query: 274 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 299 NQMVKCDPRHGKYMACCLLYRG 320
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQE 238
K+V+ + I+ K + FV+W P K + P A + +QE
Sbjct: 325 KDVNAAIATIKTKRTIQFVDWCPTGFKVGIRHKAPGHFSWATVYSTTRNYLQE 377
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 34.7 bits (76), Expect = 0.071
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ ++RG
Sbjct: 1211 NQMVKCDPRHGKYMACCMLYRG 1232
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 34.3 bits (75), Expect = 0.094
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 83 EVDEQMLNIQN-KNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELF 244
EV + NI+ K S F+ W KT +C +PP G + + N++ I+ F
Sbjct: 371 EVSDIRRNIERLKPSLKFIHWNQEGWKTGLCSVPPVGQPYSLLTLANNSCIKNTF 425
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 EQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEY 375
++F +++RKA +H YT +G++ +F + +++ L+ EY
Sbjct: 430 DRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470
>SB_29103| Best HMM Match : APC10 (HMM E-Value=0.00051)
Length = 717
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 661 NQNWGFRFKINLVNNPGSFKSWLFCLK 581
N WG++FK+ +P SW+F L+
Sbjct: 671 NSEWGYKFKVTAKGSPDVALSWIFDLQ 697
>SB_16716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 599 RLKTSRVIDQIYFETEPPILVPINISLDN 685
+L T+ ID+ ++ T PP PI +S+D+
Sbjct: 248 KLMTTNSIDETFYSTSPPEGFPITLSIDD 276
>SB_25959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 546 TVSGLRTCFLNFFKQ--NSHDLKLPGLLTKFILKRNPQFWFQLT 671
TV G+R CFL+ + N L+LP L+ LKR QF +LT
Sbjct: 125 TVEGMR-CFLHKTAEATNPDMLELPALMIDKFLKRRQQFDSELT 167
>SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 142 DPQQREDRRVRHSSSWSQDGRHLHRKLHRHPGAVQ 246
+ ++RE R SS+ ++GR RK H+H +V+
Sbjct: 48 EKRKREKRTRGEMSSYEEEGRRSRRKSHKHSLSVE 82
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 202 RHLHRKLHRHPGAVQAHLEQFTAMF 276
RHL +H HP +Q H +++ A F
Sbjct: 459 RHLGYNVHDHPEQIQFHCDEYIAAF 483
>SB_43681| Best HMM Match : MAM (HMM E-Value=2.5e-20)
Length = 1468
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 155 VKTAVCDIPPRGLKMAATFIGNSTAIQELFKRIWNSSPLCSGAR 286
++ VC G + ++ +G+ A+QE F ++ N S + +G+R
Sbjct: 257 IEDLVCQEERHGRYVCSSNVGSVYAMQEHFNKVTNGSSVFTGSR 300
>SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018)
Length = 353
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 253 LEQFTAMFRRKAFLHWYTGEGMDE--MEFTEAESNMN 357
LEQ + +RK LHW G D+ M +AE+++N
Sbjct: 58 LEQEPLLAKRKTALHWAAKHGRDDVAMMVAKAEADIN 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,876,681
Number of Sequences: 59808
Number of extensions: 345637
Number of successful extensions: 1188
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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