Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30739
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           27   0.73 
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    25   2.2  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   5.2  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.0  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.0  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 374 YSETRSFMLLSASVNSISSMPSPVYQCKKALR-LNIAVN 261
           + +TR+  +L  S N+I S+P  ++     LR LNI+ N
Sbjct: 167 FGQTRNLEVLDLSTNNIWSLPDHLFCSLSGLRSLNISSN 205


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 233 QELFKRIWNSSPLCSGARLSCIGTPARAW 319
           +EL K+  N++  C     SC  TP  AW
Sbjct: 99  EELAKQAGNNARSCQYQHDSCRNTPVYAW 127


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 299 QCKKALRLNIAVNCSRC 249
           QC KAL L+I + C  C
Sbjct: 341 QCHKALHLDIGLRCVVC 357


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 660 TRIGGSVSK*IWSITREVLSRGCSV*KSLESMSSILTLYRNHLR 529
           T IGGSV   + ++  + +S GCS  K L  +   L    N ++
Sbjct: 400 TAIGGSVFTRLTTVEEQNVSSGCSH-KDLHHILKELQFITNRMK 442


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 660 TRIGGSVSK*IWSITREVLSRGCSV*KSLESMSSILTLYRNHLR 529
           T IGGSV   + ++  + +S GCS  K L  +   L    N ++
Sbjct: 400 TAIGGSVFTRLTTVEEQNVSSGCSH-KDLHHILKELQFITNRMK 442


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,834
Number of Sequences: 2352
Number of extensions: 12680
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)