Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30739
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 130 9e-31
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 130 9e-31
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 127 8e-30
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 124 5e-29
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 123 1e-28
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 69 4e-12
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 69 4e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 52 5e-07
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 52 5e-07
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 52 5e-07
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 52 5e-07
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 52 5e-07
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 52 5e-07
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 51 7e-07
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 51 7e-07
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 51 9e-07
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 51 9e-07
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 50 2e-06
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 50 2e-06
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 50 2e-06
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 50 2e-06
Z81544-9|CAI79252.1| 231|Caenorhabditis elegans Hypothetical pr... 31 0.77
AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical ... 29 3.1
U23515-11|ABB51179.1| 226|Caenorhabditis elegans Hypothetical p... 27 9.5
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 130 bits (314), Expect = 9e-31
Identities = 75/136 (55%), Positives = 87/136 (63%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMMAACDPRHGRYLT AAIFRGRMSMK ++++L ++ + D +
Sbjct: 298 NMMAACDPRHGRYLTAAAIFRGRMSMK--------EVDEQMLNIQNKNSSYFVDWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFT 336
+ D G + + A+Q EQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
Score = 122 bits (295), Expect = 2e-28
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRI
Sbjct: 324 KEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRI 381
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 130 bits (314), Expect = 9e-31
Identities = 75/136 (55%), Positives = 87/136 (63%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMMAACDPRHGRYLT AAIFRGRMSMK ++++L ++ + D +
Sbjct: 298 NMMAACDPRHGRYLTAAAIFRGRMSMK--------EVDEQMLNIQNKNSSYFVDWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFT 336
+ D G + + A+Q EQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
Score = 122 bits (295), Expect = 2e-28
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRI
Sbjct: 324 KEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRI 381
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 127 bits (306), Expect = 8e-30
Identities = 72/136 (52%), Positives = 88/136 (64%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMMAACDPRHGRYLTVAA+FRGRMSM+ ++++L ++ + + +
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMR--------EVDEQMLSVQNKNSSYFVEWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFT 336
+ D G + + A+Q EQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDL+SEYQQY
Sbjct: 410 EAESNMNDLISEYQQY 425
Score = 121 bits (291), Expect = 6e-28
Identities = 54/58 (93%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
+EVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRI
Sbjct: 324 REVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRI 381
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 124 bits (300), Expect = 5e-29
Identities = 72/136 (52%), Positives = 88/136 (64%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMMAACDPRHGRYLTVAA+FRGRMSMK ++++L ++ + + +
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMK--------EVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHLEQ----FTAMFRRKAFLHWYTGEGMDEMEFT 336
+ D G + + A+Q ++ FTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
Score = 123 bits (296), Expect = 1e-28
Identities = 55/58 (94%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
KEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRG+KMAATF+GNSTAIQELFKRI
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRI 381
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 123 bits (296), Expect = 1e-28
Identities = 55/58 (94%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRI
Sbjct: 324 REVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRI 381
Score = 109 bits (263), Expect = 1e-24
Identities = 70/135 (51%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQRE--DRRVR 174
NMMAACDPRHGRYLTVA +M GR + EQ L + E V+
Sbjct: 298 NMMAACDPRHGRYLTVA-------AMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 175 HS-SSWSQDGRHLHRKLHRHPGAVQAHL----EQFTAMFRRKAFLHWYTGEGMDEMEFTE 339
+ G + + A+Q EQFTAMFRRKAFLHWYTGEGMDEMEFTE
Sbjct: 351 TAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 340 AESNMNDLVSEYQQY 384
AESNMNDL+SEYQQY
Sbjct: 411 AESNMNDLISEYQQY 425
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 120 bits (289), Expect = 1e-27
Identities = 53/58 (91%), Positives = 58/58 (100%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
+EVD+QM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRI
Sbjct: 324 REVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRI 381
Score = 114 bits (275), Expect = 5e-26
Identities = 66/136 (48%), Positives = 84/136 (61%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
NMMAACDPRHGRYLTVAA+FRGRMSM+ + +++ ++ + + +
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMR--------EVDDQMMNVQNKNSSYFVEWIPNNV 349
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHLEQFTAMF----RRKAFLHWYTGEGMDEMEFT 336
+ D G + + A+Q ++ + F RRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 337 EAESNMNDLVSEYQQY 384
EAESNMNDLVSEYQQY
Sbjct: 410 EAESNMNDLVSEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 68.5 bits (160), Expect = 4e-12
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
N+M C+ G++L+ A I+RG+ + K ++++ + DP + + + +
Sbjct: 297 NIMT-CNHNQGKFLSSAIIYRGQQTEK--------KDAEQIISVENEDPSEMIESLPKST 347
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHLE----QFTAMFRRKAFLHWYTGEGMDEMEFT 336
++ D G + A+Q L+ QF +FRRKAFLHWYT M+E EFT
Sbjct: 348 NTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFT 404
Query: 337 EAESNMNDLVSEYQQY 384
+AE+ +NDL+SE+QQY
Sbjct: 405 DAENKVNDLISEFQQY 420
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATFI NSTAIQE KRI
Sbjct: 322 KKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRI 379
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 68.5 bits (160), Expect = 4e-12
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 8/136 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
N+M C+ G++L+ A I+RG+ + K ++++ + DP + + + +
Sbjct: 297 NIMT-CNHNQGKFLSSAIIYRGQQTEK--------KDAEQIISVENEDPSEMIESLPKST 347
Query: 181 SSWSQD----GRHLHRKLHRHPGAVQAHLE----QFTAMFRRKAFLHWYTGEGMDEMEFT 336
++ D G + A+Q L+ QF +FRRKAFLHWYT M+E EFT
Sbjct: 348 NTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFT 404
Query: 337 EAESNMNDLVSEYQQY 384
+AE+ +NDL+SE+QQY
Sbjct: 405 DAENKVNDLISEFQQY 420
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 253
K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATFI NSTAIQE KRI
Sbjct: 322 KKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRI 379
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
+ M CDPR+G+Y+ ++RG + K A + + + P + + +
Sbjct: 300 SQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVG-INYQ 358
Query: 181 SSWSQDGRHLHRKLHR------HPGAVQ---AHLE-QFTAMFRRKAFLHWYTGEGMDEME 330
G + KL R + A+Q A L+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 359 PPTVVPGGDM-AKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 331 FTEAESNMNDLVSEYQQ 381
F+EA +M L +Y++
Sbjct: 418 FSEAREDMAALEKDYEE 434
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
KE++ + I+ K + FV+W P K + PP L+ A + N+TAIQ
Sbjct: 326 KEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQ 385
Query: 236 ELFKRI 253
E + R+
Sbjct: 386 EAWARL 391
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 36.7 bits (81), Expect = 0.016
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ V ++RG
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRG 319
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP + A + N+TAI
Sbjct: 324 KDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 383
Query: 236 ELFKRI 253
E + R+
Sbjct: 384 EAWSRL 389
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 36.7 bits (81), Expect = 0.016
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ V ++RG
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRG 319
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP + A + N+TAI
Sbjct: 324 KDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 383
Query: 236 ELFKRI 253
E + R+
Sbjct: 384 EAWSRL 389
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPR+G+Y+ V ++RG
Sbjct: 298 NQMVKCDPRNGKYMAVCLLYRG 319
Score = 31.1 bits (67), Expect = 0.77
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K S FV+W P K + PP + A + N+TAI
Sbjct: 324 KDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 383
Query: 236 ELFKRI 253
E + R+
Sbjct: 384 EAWSRL 389
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 36.7 bits (81), Expect = 0.016
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ V ++RG
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRG 319
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP + A + N+TAI
Sbjct: 324 KDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 383
Query: 236 ELFKRI 253
E + R+
Sbjct: 384 EAWSRL 389
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 36.7 bits (81), Expect = 0.016
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ V ++RG
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRG 319
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K + FV+W P K + PP + A + N+TAI
Sbjct: 324 KDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 383
Query: 236 ELFKRI 253
E + R+
Sbjct: 384 EAWSRL 389
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 392 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 33.9 bits (74), Expect = 0.11
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPR+G+Y+ V ++RG
Sbjct: 298 NQMVKCDPRNGKYMAVCLLYRG 319
Score = 31.1 bits (67), Expect = 0.77
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K S FV+W P K + PP + A + N+TAI
Sbjct: 324 KDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 383
Query: 236 ELFKRI 253
E + R+
Sbjct: 384 EAWSRL 389
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 29 KFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 51.2 bits (117), Expect = 7e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 400 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
Score = 31.1 bits (67), Expect = 0.77
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 7 MAACDPRHGRYLTVAAIFRG 66
M CDPR G+Y+ V ++RG
Sbjct: 308 MVKCDPRRGKYMAVCLLYRG 327
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMAATFIGNSTAIQ 235
K+++ + ++ K + FVEW P K + PP + + I N+TAI
Sbjct: 332 KDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIA 391
Query: 236 ELFKRI 253
E + R+
Sbjct: 392 EAWARL 397
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 51.2 bits (117), Expect = 7e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 372 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
Score = 31.1 bits (67), Expect = 0.77
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 7 MAACDPRHGRYLTVAAIFRG 66
M CDPR G+Y+ V ++RG
Sbjct: 280 MVKCDPRRGKYMAVCLLYRG 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMAATFIGNSTAIQ 235
K+++ + ++ K + FVEW P K + PP + + I N+TAI
Sbjct: 304 KDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIA 363
Query: 236 ELFKRI 253
E + R+
Sbjct: 364 EAWARL 369
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 50.8 bits (116), Expect = 9e-07
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHS 180
N M CDP G+Y+ V ++RG + K A + + + P + + +
Sbjct: 303 NQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVG-INYQ 361
Query: 181 SSWSQDGRHLHRKLHR------HPGAVQ---AHLE-QFTAMFRRKAFLHWYTGEGMDEME 330
+ + +G L K+HR + A+ A L+ +F M+ ++AF+HW+ GEGM+E E
Sbjct: 362 APITVEGGDL-AKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGE 420
Query: 331 FTEAESNMNDLVSEYQQ 381
F EA ++ L +Y +
Sbjct: 421 FMEARDDLAALEKDYAE 437
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 50.8 bits (116), Expect = 9e-07
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Frame = +1
Query: 7 MAACDPRHGRYLTVAAIFRGRMSMKGGRRANA*HPEQELLILRGMDPQQREDRRVRHSSS 186
M CDPR G+Y+ ++RG + K A A + + P + + +
Sbjct: 307 MVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVG-INYQPP 365
Query: 187 WSQDGRHLHRKLHR------HPGAVQ---AHLE-QFTAMFRRKAFLHWYTGEGMDEMEFT 336
G L KL R + A+ A L+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 366 TVVPGADLS-KLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 424
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 425 EAREDLAALEKDYEE 439
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + +++ K S FV+W P K + PP L+ A + N+TAI
Sbjct: 331 KDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIA 390
Query: 236 ELFKRI 253
E + R+
Sbjct: 391 EAWARL 396
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
Score = 35.5 bits (78), Expect = 0.036
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDP+HG+Y+ V ++RG
Sbjct: 295 NQMVKCDPKHGKYMAVCLLYRG 316
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V + +I+ + S FV+W P K + PP + A + N+TAI
Sbjct: 321 KDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIA 380
Query: 236 ELFKRI 253
E ++R+
Sbjct: 381 EAWQRL 386
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ V +FRG
Sbjct: 300 NQMVKCDPRHGKYMAVCLLFRG 321
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K S FV+W P K + PP + A + N+TAI
Sbjct: 326 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 385
Query: 236 ELFKRI 253
E + R+
Sbjct: 386 EAWARL 391
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 393 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ V +FRG
Sbjct: 299 NQMVKCDPRHGKYMAVCLLFRG 320
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K S FV+W P K + PP + A + N+TAI
Sbjct: 325 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 384
Query: 236 ELFKRI 253
E + R+
Sbjct: 385 EAWARL 390
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ V +FRG
Sbjct: 300 NQMVKCDPRHGKYMAVCLLFRG 321
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K S FV+W P K + PP + A + N+TAI
Sbjct: 326 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 385
Query: 236 ELFKRI 253
E + R+
Sbjct: 386 EAWARL 391
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +1
Query: 259 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 394 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRG 66
N M CDPRHG+Y+ V +FRG
Sbjct: 300 NQMVKCDPRHGKYMAVCLLFRG 321
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Frame = +2
Query: 80 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTAIQ 235
K+V+ + I+ K S FV+W P K + PP + A + N+TAI
Sbjct: 326 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIA 385
Query: 236 ELFKRI 253
E + R+
Sbjct: 386 EAWARL 391
>Z81544-9|CAI79252.1| 231|Caenorhabditis elegans Hypothetical
protein F49C5.10 protein.
Length = 231
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 597 GCSV*KSLESMSSILTLYRNHLRLLKQNVTCINGIHYVCRARD 469
GC V +M L LY N ++ + C G +Y CR RD
Sbjct: 21 GCQVVNKASTMIGKLQLYFNFNKIWNPPLICNRGTNYKCRNRD 63
>AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical
protein C24G6.8 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -1
Query: 171 HTAVFTLLGIHSTKYEEFLFWMLSICSSTSF-HGHATAEDGSDGEVAAVARVTGGHH 4
+TAV L +S E+ + W++ + + F +++E+ +D E+ AV V G H
Sbjct: 145 YTAVLALKRTNSAGVEQAVAWIVERSNESDFDEDSSSSENEADEEMGAVQSVAGRTH 201
>U23515-11|ABB51179.1| 226|Caenorhabditis elegans Hypothetical
protein R144.3 protein.
Length = 226
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 148 QQREDRRVRHSSSWSQDGRHLHRKL 222
QQ E R VR++ + RH+HR+L
Sbjct: 63 QQDERRSVRNNEKLGSETRHIHRRL 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,822,145
Number of Sequences: 27780
Number of extensions: 262129
Number of successful extensions: 897
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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