Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30738
(646 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 9e-19
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 53 2e-07
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.005
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.021
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 33 0.15
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 33 0.15
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 32 0.35
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.46
SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12) 31 0.61
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.61
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 0.61
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.80
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 30 1.4
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 30 1.9
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.9
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.2
SB_45236| Best HMM Match : PRP38 (HMM E-Value=0) 29 4.3
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 5.7
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 28 7.5
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 27 9.9
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 27 9.9
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 9.9
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 27 9.9
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 90.6 bits (215), Expect = 9e-19
Identities = 64/150 (42%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Frame = +2
Query: 176 QADRRRPALQGYRRCLRPYPQGAGSPSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 355
+A R +G C + G SFWRGN AN IRYFPTQALNFAFKD+ K +F
Sbjct: 45 KAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF--- 101
Query: 356 VDKKTQFWRY-FXXXXXXXXXXXXTSLCFVYPLDFARTRLAAD--VGKGDGQRESPVSET 526
KKT F SL FVY LD+ RTRLA D VGK G+R+
Sbjct: 102 KPKKTDSNAIKFSKNIASGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMID 161
Query: 527 ASARIFKSDGLIGLVQRFSVYPFKGIII*R 616
+ SDGL+GL + F V GII+ R
Sbjct: 162 VYKKTIASDGLVGLYRGF-VISCVGIIVYR 190
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 248
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 249 LL 254
L
Sbjct: 69 FL 70
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/59 (45%), Positives = 43/59 (72%)
Frame = +3
Query: 78 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 254
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGIL 88
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 176 QADRRRPALQGYRRCLRPYPQGAGSPSFWRGNFANVIRYFPTQALNFAFKDKYKQ 340
Q + P +G L + G +++GN NVIR FP A+ FA ++YK+
Sbjct: 63 QIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 45 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDA 221
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 222 FVRIPKEQGL 251
+R + +G+
Sbjct: 61 TMRTYRAEGI 70
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 42 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGI 212
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 213 VDAFVRIPKEQGLL 254
D F I KE+G +
Sbjct: 79 KDCFRTILKEEGAM 92
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +3
Query: 93 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 251
GG A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGI 189
Score = 35.9 bits (79), Expect = 0.028
Identities = 30/92 (32%), Positives = 40/92 (43%)
Frame = +2
Query: 200 LQGYRRCLRPYPQGAGSPSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 379
+ G++ LR G S WRGN ANVI+ P + F +K K+ L G D K
Sbjct: 177 VSGFKMMLRE----GGIKSLWRGNGANVIKIAPESGIKFFAYEKAKK--LVGSDTKALGV 230
Query: 380 RYFXXXXXXXXXXXXTSLCFVYPLDFARTRLA 475
TS +YPL+ +TRLA
Sbjct: 231 TDRLLAGSMAGVASQTS---IYPLEVLKTRLA 259
Score = 33.5 bits (73), Expect = 0.15
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Frame = +2
Query: 236 QGAGSPSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXX 415
Q G SF+RG F +++ P ++ A + K +L ++
Sbjct: 278 QKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETLKNFYLNYHKNQSADPGVLVLLACGTAS 337
Query: 416 XXXTSLCFVYPLDFARTRLAADV-GKGDGQRESPVSETASARIFKSDGLIGL 568
L YPL RTRL A KG GQ ++ VS +I DG GL
Sbjct: 338 STCGQLAS-YPLSLVRTRLQAQAREKGGGQGDNMVS--VLRKIITEDGFKGL 386
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 87 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 254
LAG S ++ V P E +K L VQHV+K ++ YKG+ A I +E+G+L
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTILREEGIL 209
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 66 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 245
+ + + FL GG SA ++++ +P+E VK+L QV + G++ F + K +
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108
Query: 246 GL 251
G+
Sbjct: 109 GI 110
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 245 GSPSFWRGNFANVIRYFPTQALNFA 319
G +FW+GN + IR FP A+ +A
Sbjct: 109 GIKAFWKGNGVSCIRLFPYSAVQYA 133
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Frame = +3
Query: 60 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGI 212
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGM 69
Query: 213 VDAFVRIPKEQGL--LHSGVV 269
+ V + K +G+ ++ G++
Sbjct: 70 LGTMVTLFKTEGMKTMYKGLI 90
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 33.5 bits (73), Expect = 0.15
Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 5/151 (3%)
Frame = +2
Query: 161 STARQQADRRRPALQ--GYRR---CLRPYPQGAGSPSFWRGNFANVIRYFPTQALNFAFK 325
S R +D R P Q GY L + G + WRG +R A A
Sbjct: 17 SLIRMTSDGRLPPEQRRGYTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATY 76
Query: 326 DKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQR 505
+ KQ+ L + +F S+ P+D A+TR+ ++ DG+
Sbjct: 77 SQAKQLLLSTKYFEDNIVCHFGASMISGLATTVASM----PVDIAKTRIQ-NMRIIDGKP 131
Query: 506 ESPVSETASARIFKSDGLIGLVQRFSVYPFK 598
E + ARI +++G+ L + F+ Y F+
Sbjct: 132 EYKGTMDVLARIVRNEGVFALWKGFTPYYFR 162
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 129 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 251
AP ERVK LLQVQ K+ RY+G+ D +++ + GL
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGL 216
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 99 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 248
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEG 969
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 31.9 bits (69), Expect = 0.46
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +3
Query: 48 SNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFV 227
SNL A +AGG + VS + P + +K +Q + RYKG++D +
Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179
Query: 228 RIPKEQGLL 254
+ KE+G++
Sbjct: 180 QSYKEEGMI 188
>SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12)
Length = 886
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 567 RPIRPSDLKILADAVSETGDSRWPSPLPTSAARR--VRAKSRGYTKHR 430
RP+ P L+ A+A + G W PT R +AKS G+ +HR
Sbjct: 154 RPLPPKLLRTAANARAREGQPYWYIEKPTKRGRDTCTQAKSPGFVRHR 201
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +3
Query: 36 SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIV 215
S K+ DP + AG I+ + + P++RVK +LQ++ + Y G V
Sbjct: 126 SYKLPVSKDP-ELLRSLAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPV 180
Query: 216 DAFVRIPKEQGL 251
D RI +E G+
Sbjct: 181 DCLRRIYREAGV 192
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 96 GISAAVSKTAVAPIERVKLLLQVQH 170
G+S +KT AP+ER+K+L Q Q+
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN 87
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +3
Query: 84 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 251
F+ GG++ AVS+T P++ V+ +Q ++ + +Y ++ V + K+ G+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGI 228
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 253
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 253
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 253
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 253
A+ S RQQ R RP GY +R R YP+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 90 AGGISAAVSKTAVAPIERVKLLLQ 161
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 482 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 360
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 260 WRGNFANVIRYFPTQALNFAFKDKYKQV 343
W G F++VI F A+N AF+++YK++
Sbjct: 282 WIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 253
A+ S RQQ R RP +GY +R R YP+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_45236| Best HMM Match : PRP38 (HMM E-Value=0)
Length = 381
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -3
Query: 485 RHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGTPACT 330
R R RD RSR R + RR R +RS R S +HR + +CT
Sbjct: 321 RSRSRDRR-RSRSRERRRDDRKRRSRERSPKRRSREREESRSRHRGRSNSCT 371
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 479 RRRDGYVRSRGGTRSTERWLRRHHR-RPDYQRSNARTASSCQHRRGTP 339
R+ + R +GG R+T+ ++H R +PD +R+ R R+GTP
Sbjct: 865 RKVEERARHKGGNRATQEREKKHRRNQPDKRRTQMRIP-----RKGTP 907
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 206 GYRRCLRPYPQGAGSPSFWRGNFANVIRYFPTQA 307
GY C++ G +F +G A ++R FPT A
Sbjct: 402 GYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -3
Query: 482 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGTPACTCP 324
HR+ + RSR R R+ R R +SSC+ RR P
Sbjct: 275 HRKHRSHSRSRSPRSKRSRSPRKRRRSKSRSPRRYRDSSSCRRRRSRSRSRSP 327
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 114 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLHS 260
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L S
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDS 326
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 392 QRSNARTASSCQHRRGTPACTCP 324
Q + R S CQ RRG C CP
Sbjct: 934 QLVSCRFYSKCQRRRGGAQCVCP 956
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 245 GSPSFWRGNFANVIRYFPTQALNFAFKDKYKQ 340
G +++GN N++R P A+ FA +++K+
Sbjct: 606 GLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 260 WRGNFANVIRYFPTQALNFAFKDKYKQV 343
W G ++VI F A+N F+D+YK++
Sbjct: 149 WLGTLSSVINPFIYGAMNPVFRDEYKKL 176
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,350,487
Number of Sequences: 59808
Number of extensions: 353092
Number of successful extensions: 1377
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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