Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30736
         (729 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22YP9 Cluster: Phospholipid-translocating P-type ATPas...    37   0.58 
UniRef50_A0LZ28 Cluster: Membrane protein; n=1; Gramella forseti...    36   1.0  
UniRef50_A5C7Y9 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q4UCJ0 Cluster: Putative uncharacterized protein; n=2; ...    33   7.2  
UniRef50_Q11R27 Cluster: A-glycosyltransferase-related protein, ...    33   9.5  

>UniRef50_Q22YP9 Cluster: Phospholipid-translocating P-type ATPase,
            flippase family protein; n=1; Tetrahymena thermophila
            SB210|Rep: Phospholipid-translocating P-type ATPase,
            flippase family protein - Tetrahymena thermophila SB210
          Length = 1342

 Score = 36.7 bits (81), Expect = 0.58
 Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
 Frame = -2

Query: 515  PILWGSSSLTMHRAYWLILMLFLSLNSRHKFALFFCRMVVLDTLP--LFWAVASRYLNFQ 342
            P LW   S+T++ A  L++ + L++N+R+   +    ++    +P  L+  VA+    F 
Sbjct: 1190 PDLW-VVSITLYSAIILVVDVKLAVNTRYWTMIMLLSIIFTSLVPYFLYIFVANLIEQFN 1248

Query: 341  ITLHSTTIVVKPSLSRSFFFSQTKVIN*IITVIYLLRLTYTLF 213
            + L +  I   P      FFS   ++   + +IYL ++ Y  F
Sbjct: 1249 VYLTAQAIFTMPDFYLIIFFSLFLIVTFDLFIIYLNQVDYRGF 1291


>UniRef50_A0LZ28 Cluster: Membrane protein; n=1; Gramella forsetii
           KT0803|Rep: Membrane protein - Gramella forsetii (strain
           KT0803)
          Length = 232

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = -1

Query: 255 YYSNILTPSYLYFIQYFNNSSRKTLFFVTVPLKIV 151
           YY N+L  + +  I Y N+ SRK++FF+T+ + IV
Sbjct: 148 YYINLLVLAIVALIYYLNSYSRKSVFFITLVMAIV 182


>UniRef50_A5C7Y9 Cluster: Putative uncharacterized protein; n=1; Vitis
            vinifera|Rep: Putative uncharacterized protein - Vitis
            vinifera (Grape)
          Length = 1467

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = +1

Query: 106  RSSHNGRQQTHSGLINYF*WHCNKKKC-FSTTIIKILNKV*VRRS-KYITVII*LITFVC 279
            R  H    Q     I  F    N KKC F  T  K+L  + + R  KYI+  I  +T++C
Sbjct: 873  RVDHLATLQIFFERIRQFRLRLNPKKCTFGVTYGKLLGHIVIERGIKYISRFIARLTYIC 932

Query: 280  EKKKDLLR 303
            E    LLR
Sbjct: 933  EPICRLLR 940


>UniRef50_Q4UCJ0 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 634

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 24/107 (22%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
 Frame = -2

Query: 470 WLILMLFLSLNSRHKFALFFC--RMVVLDTLPLFWAVASRYLNFQITLHSTTIVVKPSLS 297
           +++ ++F++  +R    L      + +L TLPL+  + S+ +  Q T +     +KP   
Sbjct: 315 FVVFLIFVNCLTRSNAILLLIPFSLYLLKTLPLYHLIRSKLVPRQPTTNKNKTNLKPCDP 374

Query: 296 RSFFFSQTKVIN*IITVIYLLRLTYTLFSILI--IVVEKHFFLLQCH 162
            + F   TK +  +I + YLL+    L+ +L+  ++++ + + L C+
Sbjct: 375 NTKFNFITKFV--LINLCYLLKFLLYLYVLLLPFLLIQLYGYKLFCN 419


>UniRef50_Q11R27 Cluster: A-glycosyltransferase-related protein,
           glycosyltransferase family 4 protein; n=1; Cytophaga
           hutchinsonii ATCC 33406|Rep:
           A-glycosyltransferase-related protein,
           glycosyltransferase family 4 protein - Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 359

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = -2

Query: 506 WGSSSLTMHRAYWLILMLFLS---LNSRHKFALFFCRMVVLDTLPLFWAVASRYLNFQIT 336
           WG S +     Y++   LFL    L  R+K  + +   +    LP   A+A +++N ++ 
Sbjct: 61  WGKSKVQT-LLYFVFSQLFLFIRLLKYRNKDVVIYVNTI----LPFGAALAGKFMNKKVV 115

Query: 335 LHSTTIVVKPSLSRSFFF 282
            H     +KP+L +SF F
Sbjct: 116 YHIHETSIKPALFKSFLF 133


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,155,191
Number of Sequences: 1657284
Number of extensions: 12801001
Number of successful extensions: 27588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27584
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)