Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30736
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.63 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.7  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.7  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 45  RMSRSKFKPDLKTRTGTSHSSILAQWTTTNS 137
           R S +  KP L   TG++ S  +A  T TNS
Sbjct: 183 RDSPNYIKPQLHVSTGSTSSPTIASATYTNS 213


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 450 KQHKN*PVSSMHCE 491
           KQ  N P+S+ HC+
Sbjct: 87  KQQANPPISTEHCD 100


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 505 HKIGTDSLRLT*RSFFSV 558
           H+IGT  +  T ++FFS+
Sbjct: 336 HQIGTLEVAFTGKNFFSI 353


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 505 HKIGTDSLRLT*RSFFSV 558
           H+IGT  +  T ++FFS+
Sbjct: 371 HQIGTLEVAFTGKNFFSI 388


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 505 HKIGTDSLRLT*RSFFSV 558
           H+IGT  +  T ++FFS+
Sbjct: 371 HQIGTLEVAFTGKNFFSI 388


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,692
Number of Sequences: 336
Number of extensions: 3460
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)