Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30732
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    25   0.57 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.3  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -1

Query: 166 FSSLVRRVLLTRKHHGIQFNQPILKSVKAKIFSD 65
           F++LVR +    +H G+     +L +V + ++ D
Sbjct: 189 FTALVREIRNAFRHDGLLLTMSVLPNVNSSVYYD 222


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 609 NTFPGKSIDPHGDVRGPHLKS 671
           N  P   ID HG  RGP +K+
Sbjct: 322 NPCPDIIIDVHGTRRGPKIKT 342


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = -1

Query: 634 SMDFPGKVFNFYLGKKILELCPLLIIIDFIKLSGYGTW 521
           +M  P   F    G  + ELC LL  I  +     G W
Sbjct: 183 TMAVPIAKFRLQEGYHVPELCELLDAIHVMSYDLRGNW 220


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 622 PGKVFNFYLGKKILELCPLLIIIDFIKLSG 533
           P K+ +FY    ILE+   +I I  + ++G
Sbjct: 67  PTKLISFYKSTAILEIAFEVIFIVTVWMTG 96


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 256 HSKYVLDLSSNC 221
           H K VLD+  NC
Sbjct: 188 HHKIVLDMGKNC 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,450
Number of Sequences: 336
Number of extensions: 3090
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)