Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30732
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical ...    28   7.0  
Z81484-7|CAE11296.1|  221|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical p...    27   9.3  
AC025724-4|AAP31423.1|  612|Caenorhabditis elegans Hypothetical ...    27   9.3  
AC025724-3|AAG23379.2|  662|Caenorhabditis elegans Hypothetical ...    27   9.3  

>AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical
           protein T05B4.8 protein.
          Length = 312

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 253 SKYVLDLSSNCQCWRRETKVSKIVCDSLYFSSLVRRVLL 137
           + Y+ D SSNC  W R T+   ++  SL  + ++  V L
Sbjct: 33  TSYIADSSSNCASWARTTRFCVVL--SLLLNKMIALVSL 69


>Z81484-7|CAE11296.1|  221|Caenorhabditis elegans Hypothetical
           protein C47A10.7 protein.
          Length = 221

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 666 SSVAHVHPRGGQWIFPERYLIFIWEKKFWNFARYSLL 556
           S +A++ P     +F  R+ I    K FW +AR+ ++
Sbjct: 98  SVIAYLMPVSIICLFENRFYILFASKTFWRYARHPII 134


>Z81142-5|CAB03507.1|  319|Caenorhabditis elegans Hypothetical
           protein ZK1037.8 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 630 WIFPERYLIFIWEKKFWNFARYSLL*TLLNY 538
           ++F  RY +   +  FW + RY  L  +LN+
Sbjct: 109 FMFENRYFVLFGQNSFWKYLRYPFL--ILNF 137


>Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 618 ERYLIFIWEKKFWNFARYSL 559
           E Y+ + WEK  +N  RY+L
Sbjct: 199 ENYITYFWEKYIYNAGRYAL 218


>Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 618 ERYLIFIWEKKFWNFARYSL 559
           E Y+ + WEK  +N  RY+L
Sbjct: 199 ENYITYFWEKYIYNAGRYAL 218


>AC025724-4|AAP31423.1|  612|Caenorhabditis elegans Hypothetical
           protein Y67D8C.3b protein.
          Length = 612

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 201 PKFPRLSVIVSTFPL*SDESF*HVSTTAFNSTNQF*RVLKQRYLV 67
           P FPR S I ST+P    E F H S   ++S  ++   +  R+L+
Sbjct: 46  PVFPR-SRIPSTYPYRRVEPFEHTSEHGYSSVERYNEEVATRFLL 89


>AC025724-3|AAG23379.2|  662|Caenorhabditis elegans Hypothetical
           protein Y67D8C.3a protein.
          Length = 662

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 201 PKFPRLSVIVSTFPL*SDESF*HVSTTAFNSTNQF*RVLKQRYLV 67
           P FPR S I ST+P    E F H S   ++S  ++   +  R+L+
Sbjct: 96  PVFPR-SRIPSTYPYRRVEPFEHTSEHGYSSVERYNEEVATRFLL 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,433,332
Number of Sequences: 27780
Number of extensions: 274411
Number of successful extensions: 483
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)