Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30731
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 149 3e-35
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 133 2e-30
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 133 2e-30
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 103 2e-21
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 98 9e-20
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 3e-17
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 67 2e-10
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 66 6e-10
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 59 7e-08
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 58 2e-07
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 57 3e-07
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 54 2e-06
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 49 5e-05
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 49 5e-05
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 49 7e-05
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 48 2e-04
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 46 7e-04
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 45 9e-04
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 45 0.001
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 43 0.003
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 43 0.005
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 41 0.014
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 40 0.032
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 38 0.099
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 38 0.099
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 38 0.17
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 37 0.30
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.70
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 35 1.2
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 34 2.1
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 33 2.8
UniRef50_A4CA20 Cluster: Glutathione-regulated potassium-efflux ... 33 4.9
UniRef50_A5E4V1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ... 32 6.5
UniRef50_Q339B5 Cluster: Retrotransposon protein, putative, Ty3-... 32 8.6
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 32 8.6
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 149 bits (362), Expect = 3e-35
Identities = 66/77 (85%), Positives = 73/77 (94%)
Frame = +3
Query: 24 NHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 203
+HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL
Sbjct: 15 SHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 74
Query: 204 IKNGKKVTAFVPRDGCL 254
IKNGKK+TAFVP DGCL
Sbjct: 75 IKNGKKITAFVPNDGCL 91
Score = 103 bits (248), Expect = 2e-21
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = +2
Query: 254 NHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 409
N IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KKERPRS
Sbjct: 92 NFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 133 bits (322), Expect = 2e-30
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = +3
Query: 27 HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 206
HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+EAKQPNSAI KC RVQL+
Sbjct: 87 HRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLV 145
Query: 207 KNGKKVTAFVPRDGCLTTSKK 269
KNGKK+ AFVP DGCL K+
Sbjct: 146 KNGKKIAAFVPNDGCLNFIKE 166
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 133 bits (322), Expect = 2e-30
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +3
Query: 27 HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 206
HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQPNSAIRKCVRVQLI
Sbjct: 18 HRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLI 77
Query: 207 KNGKKVTAFVPRDGCL 254
KNGKKVTAFVP DGCL
Sbjct: 78 KNGKKVTAFVPNDGCL 93
Score = 91.1 bits (216), Expect = 1e-17
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2
Query: 254 NHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 409
N ++ENDEVL+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 94 NFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 103 bits (247), Expect = 2e-21
Identities = 46/78 (58%), Positives = 61/78 (78%)
Frame = +3
Query: 21 VNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 200
V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+R+Q
Sbjct: 12 VHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQ 71
Query: 201 LIKNGKKVTAFVPRDGCL 254
LIKNG+++TAF P DG +
Sbjct: 72 LIKNGRQITAFCPGDGAI 89
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 254 NHIEENDEVLVAGFG-RKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 403
N I+E+DEV + G G R G + GDIPGVRF+V KV +VSL + K+++P
Sbjct: 90 NFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 98.3 bits (234), Expect = 9e-20
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = +3
Query: 30 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 209
R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN+A+RKCVRVQL+K
Sbjct: 20 RQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVK 79
Query: 210 NGKKVTAFVPRDGCL 254
NGK VTAFVP DG L
Sbjct: 80 NGKVVTAFVPLDGSL 94
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/51 (52%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +2
Query: 254 NHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 403
N+I E+DEV++ G +G ++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 95 NYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 3e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +2
Query: 272 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 409
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 67.3 bits (157), Expect = 2e-10
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +3
Query: 30 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIK 209
R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN+A+RKCV +
Sbjct: 20 RQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVTPDTLI 79
Query: 210 N 212
N
Sbjct: 80 N 80
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 254 NHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 403
N I E+DEV++ G +G A GD+PGVRFKV KV VSL A+ KK++P
Sbjct: 609 NLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNGVSLKAILLGKKQKP 659
Score = 40.3 bits (90), Expect = 0.024
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +3
Query: 186 CVRVQLIKNGKKVTAFVPRDGCL 254
CVRVQL KNGK VTAFVP DG L
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGL 608
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 65.7 bits (153), Expect = 6e-10
Identities = 32/52 (61%), Positives = 36/52 (69%)
Frame = -2
Query: 417 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSS 262
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSS 54
Score = 61.7 bits (143), Expect = 9e-09
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = -1
Query: 253 RQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 119
+QPS GT AVTF PFL++ T TH +AE GCL S P FS+T+P A
Sbjct: 58 KQPSFGTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 58.8 bits (136), Expect = 7e-08
Identities = 31/75 (41%), Positives = 41/75 (54%)
Frame = -3
Query: 251 ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHV 72
A + G E L VLNEL+ DA DGR+ L F + ++LC+R T +R+ L V
Sbjct: 21 AAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQV 80
Query: 71 GFLEFFVRPSLFTTV 27
GFL FV P L +V
Sbjct: 81 GFLVLFVMPLLVPSV 95
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +3
Query: 96 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG 132
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 56.8 bits (131), Expect = 3e-07
Identities = 30/75 (40%), Positives = 40/75 (53%)
Frame = -3
Query: 251 ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHV 72
A + G E L VLNEL+ DA DGR+ L F + ++LC+R +R+ L V
Sbjct: 52 AAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQV 111
Query: 71 GFLEFFVRPSLFTTV 27
GFL FV P L +V
Sbjct: 112 GFLVLFVMPLLVPSV 126
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = -1
Query: 382 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YFVVFFDVVRQPSRGTNAVTFFPFL 206
++S++R++GYF HLK +S ++T +TF+T+S + + ++F + V+ G P L
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVL 66
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +3
Query: 72 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG 70
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +2
Query: 272 DEVLVAGFGRKGHAVGDIPGVRFKVVK 352
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 49.2 bits (112), Expect = 5e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +3
Query: 72 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 113
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 49.2 bits (112), Expect = 5e-05
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +3
Query: 72 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 48.8 bits (111), Expect = 7e-05
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +3
Query: 99 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG 110
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +3
Query: 72 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
H+ + P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG 117
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 45.6 bits (103), Expect = 7e-04
Identities = 19/42 (45%), Positives = 32/42 (76%)
Frame = +3
Query: 123 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG 130
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 45.2 bits (102), Expect = 9e-04
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = -3
Query: 248 TVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVG 69
TV+ +E HFL VL EL++DA ++G V LL F + DDA C +E + L R H
Sbjct: 66 TVSWNESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR-HC- 123
Query: 68 FLEFFVRPSLFTTV 27
F + PSL ++V
Sbjct: 124 FNVSCIVPSLLSSV 137
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +3
Query: 84 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG 71
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 90 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 42.7 bits (96), Expect = 0.005
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +3
Query: 108 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG 117
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 41.1 bits (92), Expect = 0.014
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +3
Query: 123 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG 99
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 39.9 bits (89), Expect = 0.032
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 108 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIPGIG 92
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 38.3 bits (85), Expect = 0.099
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 69 AHMGTKWKANP--FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 242
A TK K++ G K + + + ++PNSA+RK RV+L NG+ TA++P
Sbjct: 62 ARKSTKRKSSVPLLDGCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPG 120
Query: 243 DG 248
+G
Sbjct: 121 EG 122
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 38.3 bits (85), Expect = 0.099
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 84 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
K K+ +GI L V K+PNSA+RK RV+L G +VTA++P G
Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIPGVG 71
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 37.5 bits (83), Expect = 0.17
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +3
Query: 63 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 242
K + + K ++ F KG+ ++ K+PNSA+RK +++L KN K++ A++P
Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67
Query: 243 DG 248
+G
Sbjct: 68 EG 69
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 36.7 bits (81), Expect = 0.30
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +3
Query: 63 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 242
+K K + G KG+ L+ + K+PNS RK R++L NG VT ++P
Sbjct: 90 RKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPG 148
Query: 243 DG 248
+G
Sbjct: 149 EG 150
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 35.5 bits (78), Expect = 0.70
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +3
Query: 123 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVP 239
KG+ ++ + K+PNSA RKC ++L NGK ++A++P
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP 73
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 34.7 bits (76), Expect = 1.2
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 108 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
G KG+ + V ++PNS +RK RV+L G+ VT VP +G
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG 172
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +3
Query: 141 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
+VG+ + K+PNS RK RV+L GK +TA++P +G
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG 84
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 33.9 bits (74), Expect = 2.1
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 123 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLTTSK 266
+G + + + K+PNSA RK ++L KN KK+ A++P + + K
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIPGERSVVRDK 74
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 33.5 bits (73), Expect = 2.8
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 81 TKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
TK K+ KGI ++ K+PNSA RK +V L NGK + ++ +G
Sbjct: 17 TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG 71
>UniRef50_A4CA20 Cluster: Glutathione-regulated potassium-efflux
system protein KefC; n=3; Alteromonadales|Rep:
Glutathione-regulated potassium-efflux system protein
KefC - Pseudoalteromonas tunicata D2
Length = 617
Score = 32.7 bits (71), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 215 KESDRIRPP*RLPNHIEENDEVLVAGFGRKGHAVG 319
++S R P P HIE V++AG+GR G +G
Sbjct: 389 EKSSRHAPSFDKPEHIEATKHVIIAGYGRFGQIIG 423
>UniRef50_A5E4V1 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 515
Score = 32.7 bits (71), Expect = 4.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 129 IVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLTTSK 266
++L KVG + P+ + +CV L + + V +F+P DG T K
Sbjct: 266 LILNKVGAHLELPS--LHRCVNYDLFRERRGVLSFIPPDGKTTLMK 309
>UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1;
Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
protein - Mesorhizobium sp. (strain BNC1)
Length = 338
Score = 32.3 bits (70), Expect = 6.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 214 PFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 119
P + R+H ++ E+ C + P +S T+PFA
Sbjct: 240 PTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271
>UniRef50_Q339B5 Cluster: Retrotransposon protein, putative,
Ty3-gypsy subclass; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty3-gypsy subclass - Oryza sativa subsp. japonica (Rice)
Length = 467
Score = 31.9 bits (69), Expect = 8.6
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 78 GTKWKANPFGGASHAKGIVLEKVGVEAKQPNS--AIRKCVRVQLIKNGKKVTAFVPRDGC 251
G+ WK A+ G ++ + PNS A++ C+ Q A+ P DG
Sbjct: 282 GSNWKPKKDAPAAEGSGSTTIRIASCSHHPNSNHAVKDCIIYQQFTEQYAKKAWKPADGE 341
Query: 252 LTTSKK 269
+TSKK
Sbjct: 342 QSTSKK 347
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 31.9 bits (69), Expect = 8.6
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 27 HRREQ--RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 200
H+R Q W K+F K + T+ + G H KG+++ K G + N + + +++
Sbjct: 30 HKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEKEKIE 89
Query: 201 LIK 209
L++
Sbjct: 90 LVQ 92
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,643,349
Number of Sequences: 1657284
Number of extensions: 11610109
Number of successful extensions: 26087
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 25245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26074
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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