Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30731
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...   153   5e-38
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    43   1e-04
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    28   4.5  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    28   4.5  
Z83744-2|CAB06039.1|  430|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AF025467-6|AAB71037.2|   95|Caenorhabditis elegans Hypothetical ...    27   7.8  
AF016668-7|AAB66091.3|  471|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score =  153 bits (372), Expect = 5e-38
 Identities = 66/76 (86%), Positives = 73/76 (96%)
 Frame = +3

Query: 27  HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLI 206
           HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVLEK+GVEAKQPNSAIRKCVRVQLI
Sbjct: 16  HRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLI 75

Query: 207 KNGKKVTAFVPRDGCL 254
           KNGKK+TAFVP DGCL
Sbjct: 76  KNGKKITAFVPNDGCL 91



 Score = 95.9 bits (228), Expect = 1e-20
 Identities = 43/52 (82%), Positives = 48/52 (92%)
 Frame = +2

Query: 254 NHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 409
           N +EENDEVLV+GFGR GHAVGDIPGVRFK+VKVAN SL+AL+K KKERPRS
Sbjct: 92  NFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 23/47 (48%), Positives = 29/47 (61%)
 Frame = +3

Query: 108 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 248
           G SH KGIVL+ V    K+PNS  RKC  V+L   G +V A++P  G
Sbjct: 72  GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG 117


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 345 TLKRTPGMSPTA*PLRPNPATSTSS 271
           T  RTP  +P A P RP P+ S+++
Sbjct: 38  TTMRTPAATPAAPPTRPTPSRSSAA 62


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 345 TLKRTPGMSPTA*PLRPNPATSTSS 271
           T  RTP  +P A P RP P+ S+++
Sbjct: 167 TTMRTPAATPAAPPTRPTPSRSSAA 191


>Z83744-2|CAB06039.1|  430|Caenorhabditis elegans Hypothetical
           protein C06A12.5 protein.
          Length = 430

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 269 FLRCG*ATVTGDECGHFLSVLNELY 195
           +L  G  T TG+ CG ++ +LNE+Y
Sbjct: 400 YLSNGLKTGTGELCGTYMRLLNEVY 424


>AF025467-6|AAB71037.2|   95|Caenorhabditis elegans Hypothetical
           protein R148.2 protein.
          Length = 95

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +2

Query: 248 LPNHIEENDEVLVAGFGRKGHAVGDIPGVRF----KVVKVANVSLLALYKEKKERPR 406
           + + +E+N   +++  G  G  V D  GVR     K+  +ANV  L +   K   P+
Sbjct: 1   MESKLEQNVTAMMSSTGASGITVADSEGVRLHSAGKITDMANVGSLMIADAKNMFPK 57


>AF016668-7|AAB66091.3|  471|Caenorhabditis elegans Hypothetical
           protein F36H9.1 protein.
          Length = 471

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -1

Query: 256 VRQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPF 122
           +  PSRG + + +   L S     L    L C  STP  +R  PF
Sbjct: 141 INSPSRGCSDLEYAEDLNSPNMCRLLNGLLECQCSTPYCNRDQPF 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,678,019
Number of Sequences: 27780
Number of extensions: 277577
Number of successful extensions: 562
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)