Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30730
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    27   0.15 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   4.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.6  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 70  YTVVKCVLVCIFICEFLNCHRRIPSKFRYRQF 165
           YT   CV+VCIF  ++ N +  +  + + R+F
Sbjct: 158 YTYFLCVIVCIFRGKYRNINLLLTEQLQNRRF 189


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = +1

Query: 82  KCVLVCIFICEFLNCHRRIPSKFRYRQFGHFP 177
           +C  +C+     +  +R +P K  +    +FP
Sbjct: 727 ECCAICVNATSLVESNRNVPQKCIFNGQAYFP 758


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = +1

Query: 565 PIHRMVPGCSLHSSLQCGSFQDPHSVT*RGHLTSGWPNFHLGAG 696
           PI +     S H       FQ  H+V        G P F  G G
Sbjct: 36  PIDQSAAAASWHDFDNSDFFQSEHAVIQTHPSIGGGPRFSSGVG 79


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = +1

Query: 565 PIHRMVPGCSLHSSLQCGSFQDPHSVT*RGHLTSGWPNFHLGAG 696
           PI +     S H       FQ  H+V        G P F  G G
Sbjct: 36  PIDQSAAAASWHDFDNSDFFQSEHAVIQTHPSIGGGPRFSSGVG 79


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 505 QGRSVWRQTAFCFYKVRRATTEINRKARI 419
           Q   V +QTA CF   R  T +I    ++
Sbjct: 293 QPSQVHKQTAICFKAPRYHTLDITEPVKV 321


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 305 AYVTRTEVNISTLL 264
           AYVTRT  NI  L+
Sbjct: 293 AYVTRTGANIKKLI 306


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 691 PPNGNLASQKSNAPF 647
           PPN NL    SN P+
Sbjct: 60  PPNENLVVTSSNRPW 74


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 691 PPNGNLASQKSNAPF 647
           PPN NL    SN P+
Sbjct: 61  PPNENLVVTSSNRPW 75


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 691 PPNGNLASQKSNAPF 647
           PPN NL    SN P+
Sbjct: 61  PPNENLVVTSSNRPW 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,656
Number of Sequences: 336
Number of extensions: 4107
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)