Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30725
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 149 NITPLSTRDSSTVP 108
           ++T LST+D +TVP
Sbjct: 705 SVTDLSTKDGTTVP 718



 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 748 RRGNNPTQNFFGERC*KAILGKIPFSNLQFQGRPLESHPRS 626
           R  +    +   ERC   +    P   ++  G PL S PRS
Sbjct: 803 RERSGSESSSISERCSSRVESLTPERKMEPPGVPLNSTPRS 843


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 392 LCKI*NSLFGKDNIWFKCNNF 330
           LC++ NS++G  N  F  + F
Sbjct: 224 LCQVANSIYGFQNFLFVLSTF 244


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +1

Query: 223 LEYKKGESQTKLRLWVNRTSLNCYNWKRNMYSVNVKKL-LHLNQILSLPKREFQILH 390
           + +KK  + TKL LW ++T +    +  N  S  + K+   LN   S     F I H
Sbjct: 5   INHKKFINTTKLLLWCDQT-IGLITFDINTPSFKLSKIRSFLNITASAVLLPFAIYH 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,971
Number of Sequences: 336
Number of extensions: 4195
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)