Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30725
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 145 3e-35
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 52 6e-07
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 38 0.010
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 38 0.010
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 30 2.0
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 30 2.0
AF106583-11|AAD03138.2| 129|Caenorhabditis elegans Hypothetical... 30 2.0
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical ... 29 3.5
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 29 3.5
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 28 6.2
U21324-9|AAA62560.2| 755|Caenorhabditis elegans Coenzyme q (ubi... 28 8.2
AF045638-5|AAC02562.3| 544|Caenorhabditis elegans Hypothetical ... 28 8.2
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 145 bits (352), Expect = 3e-35
Identities = 77/190 (40%), Positives = 107/190 (56%)
Frame = +1
Query: 1 LAVDIALDAVNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMR 180
LAV+I++ AV T+ V G E+DIK Y ++EKIPGG +E+S+V+ G++ NKD+ H KMR
Sbjct: 174 LAVNISIQAVKTIRVEKAGVREIDIKRYCRIEKIPGGRIEDSQVVKGIVVNKDILHAKMR 233
Query: 181 RYIENPRIILLDCPLEYKKGESQTKLRLWVNRTSLNCYNWKRNMYSVNVKKLLHLNQILS 360
R IENPRI+LLDC LEYKKGESQT L + + +++ L L
Sbjct: 234 RRIENPRIVLLDCNLEYKKGESQTSLEIMREEDISAILEQEEQAIRKQCDEIIKLKPDLV 293
Query: 361 LPKREFQILHNITXXXXXXXXSADSVKRDNNRLARACGATIVNRN*GTQESDVGTGAGLF 540
++ L K DNNRLAR CGA +V+ ++ DVGT A LF
Sbjct: 294 FTEKGISDLAQHFLLKAGITCLRRLKKTDNNRLARVCGARVVHDTSDLRDEDVGTKAQLF 353
Query: 541 EIQEDSEMKY 570
E+ + ++ Y
Sbjct: 354 EVVKIADEYY 363
Score = 99.5 bits (237), Expect = 2e-21
Identities = 42/71 (59%), Positives = 59/71 (83%)
Frame = +3
Query: 231 QKGRESDQIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKA 410
+KG +EIM E+D + +L+ EE+ +++QC+EII LKPD+VFTEKG+SDLAQH+L+KA
Sbjct: 251 KKGESQTSLEIMREEDISAILEQEEQAIRKQCDEIIKLKPDLVFTEKGISDLAQHFLLKA 310
Query: 411 GITAIRRLRKT 443
GIT +RRL+KT
Sbjct: 311 GITCLRRLKKT 321
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/118 (22%), Positives = 66/118 (55%)
Frame = +1
Query: 10 DIALDAVNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYI 189
+IA+DAV +V ++ + ++ K+E GG +E++ ++ G++ +K ++HP+M + +
Sbjct: 186 EIAVDAVLSVADIESKDVNFEM---IKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKEL 242
Query: 190 ENPRIILLDCPLEYKKGESQTKLRLWVNRTSLNCYNWKRNMYSVNVKKLLHLNQILSL 363
+N ++ +L CP E K +++ KL + +++R + ++++ L++
Sbjct: 243 KNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQVKESGATLAI 300
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/118 (22%), Positives = 66/118 (55%)
Frame = +1
Query: 10 DIALDAVNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYI 189
+IA+DAV +V ++ + ++ K+E GG +E++ ++ G++ +K ++HP+M + +
Sbjct: 186 EIAVDAVLSVADIESKDVNFEM---IKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKEL 242
Query: 190 ENPRIILLDCPLEYKKGESQTKLRLWVNRTSLNCYNWKRNMYSVNVKKLLHLNQILSL 363
+N ++ +L CP E K +++ KL + +++R + ++++ L++
Sbjct: 243 KNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQVKESGATLAI 300
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/118 (22%), Positives = 66/118 (55%)
Frame = +1
Query: 10 DIALDAVNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYI 189
+IA+DAV +V ++ + ++ K+E GG +E++ ++ G++ +K ++HP+M + +
Sbjct: 186 EIAVDAVLSVADIESKDVNFEM---IKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKEL 242
Query: 190 ENPRIILLDCPLEYKKGESQTKLRLWVNRTSLNCYNWKRNMYSVNVKKLLHLNQILSL 363
+N ++ +L CP E K +++ KL + +++R + ++++ L++
Sbjct: 243 KNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQVKESGATLAI 300
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/92 (21%), Positives = 52/92 (56%)
Frame = +1
Query: 88 KVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTKLRLW 267
K+E GG +E++ ++ G++ +K ++HP+M + ++N ++ +L CP E K +++ KL +
Sbjct: 3 KMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDIT 62
Query: 268 VNRTSLNCYNWKRNMYSVNVKKLLHLNQILSL 363
+++R + ++++ L++
Sbjct: 63 STEDFKALRDYERETFETMIRQVKESGATLAI 94
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 37.5 bits (83), Expect = 0.010
Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 3/168 (1%)
Frame = +1
Query: 79 NYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMR---RYIENPRIILLDCPLEYKKGESQ 249
N ++K+ GG + ESR++ GV F K ++ + N ++ LL+ LE K +
Sbjct: 191 NMIGIKKVNGGNLHESRLIKGVAFQKAFSYAGFEMQPKKYSNVKVALLNIELELKAEKEN 250
Query: 250 TKLRLWVNRTSLNCYNWKRNMYSVNVKKLLHLNQILSLPKREFQILHNITXXXXXXXXSA 429
++RL + + N+ ++K+ + L K + +
Sbjct: 251 AEMRLTNVSDFQAVVDAEWNILYDKLQKIHDSGANVVLSKLPIGDVATQWFADRDMFCAG 310
Query: 430 DSVKRDNNRLARACGATIVNRN*GTQESDVGTGAGLFEIQEDSEMKYF 573
+ D +RL ACG +++ +S +G +E Q SE F
Sbjct: 311 RIPQDDLDRLMSACGGSVLTTVSQIDDSVLGKCGKFYEQQVGSERYNF 358
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 37.5 bits (83), Expect = 0.010
Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 3/168 (1%)
Frame = +1
Query: 79 NYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMR---RYIENPRIILLDCPLEYKKGESQ 249
N ++K+ GG + ESR++ GV F K ++ + N ++ LL+ LE K +
Sbjct: 191 NMIGIKKVNGGNLHESRLIKGVAFQKAFSYAGFEMQPKKYSNVKVALLNIELELKAEKEN 250
Query: 250 TKLRLWVNRTSLNCYNWKRNMYSVNVKKLLHLNQILSLPKREFQILHNITXXXXXXXXSA 429
++RL + + N+ ++K+ + L K + +
Sbjct: 251 AEMRLTNVSDFQAVVDAEWNILYDKLQKIHDSGANVVLSKLPIGDVATQWFADRDMFCAG 310
Query: 430 DSVKRDNNRLARACGATIVNRN*GTQESDVGTGAGLFEIQEDSEMKYF 573
+ D +RL ACG +++ +S +G +E Q SE F
Sbjct: 311 RIPQDDLDRLMSACGGSVLTTVSQIDDSVLGKCGKFYEQQVGSERYNF 358
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +1
Query: 121 ESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTKL 258
++ ++ G++ + HP M R++++ I+ + LEY+K E + L
Sbjct: 203 DTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEVNSGL 248
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +1
Query: 121 ESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTKL 258
++ ++ G++ + HP M R++++ I+ + LEY+K E + L
Sbjct: 203 DTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEVNSGL 248
>AF106583-11|AAD03138.2| 129|Caenorhabditis elegans Hypothetical
protein F23C8.1 protein.
Length = 129
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 449 LSRFTESADSSNSSLNKVMLCKI*NSLFGKDNIWFKCNNFFT 324
+ FT + + LN++++CKI + + N WF NN F+
Sbjct: 73 IKAFTGLNEENAIKLNELVVCKILHRMGKGPNYWFYINNHFS 114
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +3
Query: 240 RESDQIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDL 386
+E D+ + Q+F K+ + E + +++ E+ LK ++ T+ +SDL
Sbjct: 315 KEQDEFQDEIRQEFLKIQENENKLIEKLMSELKTLKTELNETKNQISDL 363
>AL021171-5|CAE17871.1| 688|Caenorhabditis elegans Hypothetical
protein H04D03.4 protein.
Length = 688
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 199 RIILLDCPLEYKKGESQTKLRLWVNRTSLNCYNWKRNMY-SVNVKK-LLHLNQILSLPKR 372
R+++LDCPL K L ++L+C ++ +++ ++KK L + LS+ R
Sbjct: 289 RVVVLDCPLPVSKQNDARCLSCTSLDSALDCLSYYLDLHRGYHMKKSLKRIETFLSVSNR 348
Query: 373 EFQIL 387
+ ++
Sbjct: 349 SYDLI 353
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 208 LLDCPLEYKKGESQTKLRLWVNRTSLNCYNWKRNMYSVNVKKLL---HLNQILSLP 366
L+D P +YK GE +RL++ L N K Y++ + LN+IL LP
Sbjct: 1147 LIDPPKDYKAGEFFEDMRLYMEGVGLLAKN-KTGQYTIEKEAATIPKFLNRILGLP 1201
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 362 YRKGSFRSCTTLPC*GWNYCYPQTP 436
+R+ + R C PC G CY TP
Sbjct: 3 FRRQAIRKCALRPCSGGEACYRDTP 27
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical
protein F43C1.1 protein.
Length = 1036
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 52 NGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTH 168
NGR E+D Y+++ + G EE+R+ + ++ + H
Sbjct: 781 NGRYEIDDDEYSRIREAHGFVDEENRINGVIGSSRQIGH 819
>U21324-9|AAA62560.2| 755|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 8 protein.
Length = 755
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 137 LSTRDSSTVPPGIFSTFA*FLMSTSILPL 51
LS +DSSTVPP + F S +P+
Sbjct: 380 LSIQDSSTVPPALLQIFERVRQSADFMPI 408
>AF045638-5|AAC02562.3| 544|Caenorhabditis elegans Hypothetical
protein C35B1.2a protein.
Length = 544
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +1
Query: 94 EKIPGG--TVEESRVLSG-VMFNKDVTHPKMRRYIEN 195
+K+P G EE ++SG VMF+ D++ P+MR +EN
Sbjct: 457 QKLPDGQRVGEEVELVSGDVMFDDDIS-PEMREMVEN 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,313,790
Number of Sequences: 27780
Number of extensions: 408255
Number of successful extensions: 1093
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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