Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30725
(753 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 155 2e-38
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 54 8e-08
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 54 8e-08
At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kina... 52 5e-07
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 50 2e-06
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 47 1e-05
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 42 6e-04
At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kina... 41 8e-04
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 35 0.050
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 35 0.067
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 34 0.088
At1g22210.1 68414.m02777 trehalose-6-phosphate phosphatase, puta... 29 2.5
At5g20970.1 68418.m02493 heat shock family protein contains simi... 29 3.3
At5g13530.1 68418.m01562 protein kinase family protein / ankyrin... 29 3.3
At5g38550.1 68418.m04661 jacalin lectin family protein similar t... 29 4.4
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 29 4.4
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 29 4.4
At1g20480.1 68414.m02552 4-coumarate--CoA ligase family protein ... 29 4.4
At3g06545.1 68416.m00759 hypothetical protein 28 5.8
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 28 5.8
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 28 5.8
At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containi... 28 7.7
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 155 bits (377), Expect = 2e-38
Identities = 95/205 (46%), Positives = 119/205 (58%), Gaps = 3/205 (1%)
Frame = +1
Query: 1 LAVDIALDAVNTVTVN-DNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHP-K 174
L D+A+DA TV V+ G EVDIK Y KVEK+PGG E+S VL GVMFNKDV P K
Sbjct: 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQFEDSEVLKGVMFNKDVVAPGK 228
Query: 175 MRRYIENPRIILLDCPLEYKKGESQTKLRLWVNRTSLNCYNWKRNMYSVNV-KKLLHLNQ 351
M+R I NPRIILLDCPLEYKKGE+QT L V Y N+ ++L
Sbjct: 229 MKRKIVNPRIILLDCPLEYKKGENQTNAEL-VREEDWEVLLKLEEEYIENICVQILKFKP 287
Query: 352 ILSLPKREFQILHNITXXXXXXXXSADSVKRDNNRLARACGATIVNRN*GTQESDVGTGA 531
L + ++ L K DNNR+A+ACGA IVNR QESD+GTGA
Sbjct: 288 DLVITEKGLSDLACHYFSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDIGTGA 347
Query: 532 GLFEIQEDSEMKYFHFWSLQCQNPQ 606
GLFE+++ + +F F + C+ P+
Sbjct: 348 GLFEVKKIGD-DFFSF-IVDCKEPK 370
Score = 87.8 bits (208), Expect = 7e-18
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Frame = +3
Query: 219 PT*IQKGRESDQIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHY 398
P +KG E++ E+D+ LL+LEEE+++ C +I+ KPD+V TEKG+SDLA HY
Sbjct: 244 PLEYKKGENQTNAELVREEDWEVLLKLEEEYIENICVQILKFKPDLVITEKGLSDLACHY 303
Query: 399 LVKAGITAIRRLRKTGQQ--PSSAGVWSNNCQP*LRNSRIRCRYWSWTV*DSRRFGDEIF 572
KAG++AIRRLRKT + G N L+ S I + V ++ GD+ F
Sbjct: 304 FSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDIGTGAGLFEV---KKIGDDFF 360
Query: 573 PLLVTAVPEPPRAWHQLLLRG 635
+V + P+A +LLRG
Sbjct: 361 SFIVDC--KEPKAC-TVLLRG 378
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/83 (34%), Positives = 54/83 (65%)
Frame = +1
Query: 10 DIALDAVNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYI 189
+IA+ AV + V D R +V++ + KVE GG +E++ ++ G++ +KD++HP+M + I
Sbjct: 107 EIAVKAV--LAVADLERRDVNL-DLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQI 163
Query: 190 ENPRIILLDCPLEYKKGESQTKL 258
E+ I +L CP E K +++ K+
Sbjct: 164 EDAHIAILTCPFEPPKPKTKHKV 186
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/83 (34%), Positives = 54/83 (65%)
Frame = +1
Query: 10 DIALDAVNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYI 189
+IA+ AV + V D R +V++ + KVE GG +E++ ++ G++ +KD++HP+M + I
Sbjct: 183 EIAVKAV--LAVADLERRDVNL-DLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQI 239
Query: 190 ENPRIILLDCPLEYKKGESQTKL 258
E+ I +L CP E K +++ K+
Sbjct: 240 EDAHIAILTCPFEPPKPKTKHKV 262
>At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kinase
family protein low similarity to phosphatidylinositol
3,5-kinase [Candida albicans] GI:14571648; contains Pfam
profile PF01504: Phosphatidylinositol-4-phosphate
5-Kinase
Length = 1648
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/79 (31%), Positives = 44/79 (55%)
Frame = +1
Query: 13 IALDAVNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIE 192
+A A N V + +D NY K++ + G ES ++ G++ +K++TH +M +
Sbjct: 360 LAWQAANFVKPDTRAGGSMDPGNYVKIKCVASGNQNESILIRGIVCSKNITHKRMISQYK 419
Query: 193 NPRIILLDCPLEYKKGESQ 249
NPR++LL LEY++ Q
Sbjct: 420 NPRVMLLAGSLEYQRVAGQ 438
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = +3
Query: 279 FTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRRLRKT 443
F LLQ E EH++ +I +L+P+++ EK S AQ YL++ I+ + ++++
Sbjct: 442 FNTLLQQENEHMKAIIAKIESLRPNVLLVEKSASSYAQQYLLEKEISLVLNVKRS 496
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1756
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1
Query: 67 VDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGES 246
+D Y KV+ IP G ES V+ GV+ K+V H +M IE PR+++L LEY++ +
Sbjct: 421 MDPGGYVKVKCIPCGRRSESMVVKGVVCKKNVAHRRMTSKIEKPRLLILGGALEYQRISN 480
Query: 247 Q 249
Q
Sbjct: 481 Q 481
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 279 FTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRRLRKT 443
F LLQ E +H++ +I + PDI+ EK VS AQ YL+ I+ + ++++
Sbjct: 485 FDTLLQQEMDHLKMAVAKIDSHNPDILLVEKSVSRFAQEYLLAKDISLVLNIKRS 539
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/63 (30%), Positives = 38/63 (60%)
Frame = +3
Query: 252 QIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRR 431
Q+ + ++ K+ Q E + + + E+++ +++ T KG+ D+A Y V+AG A+RR
Sbjct: 254 QVVVNDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRR 313
Query: 432 LRK 440
+RK
Sbjct: 314 VRK 316
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 70 DIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTH---PKMRRYIENPRIILLDCPLEYKKG 240
D N ++K+PGG + +S ++ GV F K ++ + + NP+I+LL+ LE K
Sbjct: 193 DRLNLIGIKKVPGGNMRDSFLVDGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSE 252
Query: 241 ESQTKLRL 264
+ ++RL
Sbjct: 253 KENAEIRL 260
>At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1791
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +3
Query: 279 FTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRRLRK 440
F LLQ E++H++ +I A +P+I+ EK VS AQ YL+ I+ + +++
Sbjct: 498 FDTLLQQEKDHLKMAVAKIHAERPNILLVEKSVSRFAQEYLLAKDISLVLNIKR 551
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 35.1 bits (77), Expect = 0.050
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 9/132 (6%)
Frame = +1
Query: 121 ESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTKLRLWVNRTSLNCYNW 300
++R++ G++ + HP M+R EN I+ + LEY+K E
Sbjct: 206 DTRLVEGLVLDHGSRHPDMKRRAENCHILTCNVSLEYEKSEINAGFFYSNAEQREAMVTA 265
Query: 301 KRNMYSVNVKKLLHL-NQILSLPKREFQILH-------NITXXXXXXXXSADSVKRDN-N 453
+R V+K++ L N++ + F IL+ ++ + KR N
Sbjct: 266 ERRSVDERVQKIIELKNKVCAGNDNSFVILNQKGIDPPSLDLLAREGIIALRRAKRRNME 325
Query: 454 RLARACGATIVN 489
RL ACG VN
Sbjct: 326 RLVLACGGEAVN 337
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 34.7 bits (76), Expect = 0.067
Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 8/131 (6%)
Frame = +1
Query: 121 ESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTKLRLWVNRTSLNCYNW 300
++R++ G++ + HP M+R EN I+ + LEY+K E
Sbjct: 206 DTRLVEGLVLDHGSRHPDMKRRAENCHILTCNVSLEYEKSEINAGFFYSNAEQREAMVTA 265
Query: 301 KRNMYSVNVKKLLHLNQILSLPKREFQILH-------NITXXXXXXXXSADSVKRDN-NR 456
+R VKK++ L + + F +++ ++ KR N R
Sbjct: 266 ERRSVDERVKKIIELKKKVCGDNDNFVVINQKGIDPPSLDLLAREGIIGLRRAKRRNMER 325
Query: 457 LARACGATIVN 489
L ACG VN
Sbjct: 326 LVLACGGEAVN 336
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 34.3 bits (75), Expect = 0.088
Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LAVDIALDAVNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPK-M 177
L +A+DAV +V + I VD+++ V+K+ GGTV+++ + G++F+K V+
Sbjct: 178 LLAPLAVDAVLSVIDPEKPEI-VDLRDIKIVKKL-GGTVDDTHTVKGLVFDKKVSRAAGG 235
Query: 178 RRYIENPRIILLDCPLEYKKGESQTKL 258
+EN +I ++ + K + + +
Sbjct: 236 PTRVENAKIAVIQFQISPPKTDIEQSI 262
>At1g22210.1 68414.m02777 trehalose-6-phosphate phosphatase,
putative similar to trehalose-6-phosphate phosphatase
(AtTPPB) GI:2944180 from [Arabidopsis thaliana];
contains Pfam profile PF02358: Trehalose-phosphatase
Length = 320
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 88 KVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCP-LEYKKGESQTKLR 261
K + IPG TVE ++ V F + V E R++L+D P L +G +LR
Sbjct: 172 KTKSIPGATVEHNKFCLTVHFRR-VDETGWAALAEQVRLVLIDYPKLRLTQGRKVLELR 229
>At5g20970.1 68418.m02493 heat shock family protein contains
similarity to Swiss-Prot:P27397 18.0 kDa class I heat
shock protein [Daucus carota]
Length = 249
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 402 VKAGITAIRRLRKTGQQPSSAGVW 473
+K +TA R+LR TG++P+ W
Sbjct: 40 LKVSVTATRKLRLTGERPTGGNKW 63
>At5g13530.1 68418.m01562 protein kinase family protein / ankyrin
repeat family protein contains similarity to
ankyrin-related gene UNC-44 gi|790608|gb|AAA85854;
contains Pfam domains PF00023: Ankyrin repeat and
PF00069: Protein kinase domain
Length = 834
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +3
Query: 348 PDIVFTEKGVSDLAQHYLVKAGITAIRRLRKTGQQPSSAGVWSNNCQP 491
P +VF S H L+K G RLR+ G PS A V S + QP
Sbjct: 547 PPLVFALAAGSPQCVHVLIKKGANVRSRLRE-GSGPSVAHVCSYHGQP 593
>At5g38550.1 68418.m04661 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 594
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 607 GPGTNYYSVGGFLKDVPEIEDLKRESFQG 693
GPG N ++G + + +P D+KR QG
Sbjct: 427 GPGYNIKALGAYYRPIPPTPDVKRLEAQG 455
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 100 IPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEY-KKGESQTKLRLW 267
+ GGT + RV +K + K+R + +N R++LLD + G S + +RLW
Sbjct: 229 VSGGTEKVLRVWDPRTGSKSM---KLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW 282
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 100 IPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEY-KKGESQTKLRLW 267
+ GGT + RV +K + K+R + +N R++LLD + G S + +RLW
Sbjct: 229 VSGGTEKVLRVWDPRTGSKSM---KLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW 282
>At1g20480.1 68414.m02552 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
SP|Q9S725 from Arabidopsis thaliana and SP|P17814 from
Oryza sativa; contains Pfam AMP-binding enzyme domain
PF00501
Length = 565
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 73 IKNYAKVEKIPGGTVEESRVLSGVMFNKDVT 165
++NY KV+ + G + ES ++ MFNK+ T
Sbjct: 349 VENYPKVKILQGYGLTESTAIAASMFNKEET 379
>At3g06545.1 68416.m00759 hypothetical protein
Length = 191
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -2
Query: 323 LTLYMFLFQL*QFSEVLFTHNLNLV*LSPFLYSSGQSNRIMRGFSIYLLIFGWVTSLLNI 144
LT F + F+ LFT L L+ LS R+ G ++Y L GW++ L ++
Sbjct: 108 LTNKEFELSMSLFTISLFTGGLGLIQLS-------DKFRMEIGHALYTLFLGWLSCLFSM 160
Query: 143 TPLSTRDSST 114
+ RDS T
Sbjct: 161 SNNLYRDSDT 170
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 16 ALDAVNTVTVNDNGRIEVDIKNYAKVEKI 102
A DA++ +T +N +IEVD+ N K+ K+
Sbjct: 290 AQDAIHRLTDQENVQIEVDLGNGNKISKV 318
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 16 ALDAVNTVTVNDNGRIEVDIKNYAKVEKI 102
A DA++ +T +N +IEVD+ N K+ K+
Sbjct: 290 AQDAIHRLTDQENVQIEVDLGNGNKISKV 318
>At1g34160.1 68414.m04237 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 558
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 49 DNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIE 192
D GR+ D+++ +V+KIPG + E++ +N D +H + R E
Sbjct: 427 DVGRVRDDMES-KQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYE 473
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,434,778
Number of Sequences: 28952
Number of extensions: 393877
Number of successful extensions: 1124
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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