Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30720
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   0.90 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   0.90 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.2  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   8.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
 Frame = +3

Query: 417 CGVVYHMC---ILIRVCYML 467
           CG+ YH+C   I   VC+M+
Sbjct: 154 CGIQYHICNTVISATVCFMM 173


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
 Frame = +3

Query: 417 CGVVYHMC---ILIRVCYML 467
           CG+ YH+C   I   VC+M+
Sbjct: 150 CGIQYHICNTVISATVCFMM 169


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +1

Query: 220 SFLEDADDAASDNTRID 270
           S++EDA++  S+NT +D
Sbjct: 2   SYIEDANETDSNNTSLD 18


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
          protein 1 protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 94 LRNLSCALARRARGPVGR 41
          LR L CA       PVGR
Sbjct: 46 LRQLKCATGEAPCDPVGR 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,063
Number of Sequences: 336
Number of extensions: 2033
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)