Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30720
         (506 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF226996-1|AAK28321.1|  415|Homo sapiens kruppel-like zinc finge...    30   4.0  
BC018612-1|AAH18612.1|  871|Homo sapiens zinc finger protein 473...    29   7.1  
AF454744-1|AAL51029.1|  871|Homo sapiens zinc finger protein ZFP...    29   7.1  
AB032967-1|BAA86455.1|  914|Homo sapiens KIAA1141 protein protein.     29   7.1  

>AF226996-1|AAK28321.1|  415|Homo sapiens kruppel-like zinc finger
           factor X31 protein.
          Length = 415

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 485 RPRSCREHVTNPN*YTHMINHTAL*LVEFLYHIAQCKRSSRCHVQFRR 342
           +P  C+E     N  T +I H  +   E  Y   +C ++ RC+ QFR+
Sbjct: 162 KPYQCKECGKGFNNNTKLIQHQRIHTGEKPYECNECGKAFRCNSQFRQ 209


>BC018612-1|AAH18612.1|  871|Homo sapiens zinc finger protein 473
           protein.
          Length = 871

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 485 RPRSCREHVTNPN*YTHMINHTAL*LVEFLYHIAQCKRS 369
           RP  C+E V + +  +H++ H A+   E  Y  A+CK +
Sbjct: 457 RPHKCQECVRSFSRPSHLMRHQAIHTAEKPYSCAECKET 495


>AF454744-1|AAL51029.1|  871|Homo sapiens zinc finger protein ZFP100
           protein.
          Length = 871

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 485 RPRSCREHVTNPN*YTHMINHTAL*LVEFLYHIAQCKRS 369
           RP  C+E V + +  +H++ H A+   E  Y  A+CK +
Sbjct: 457 RPHKCQECVRSFSRPSHLMRHQAIHTAEKPYSCAECKET 495


>AB032967-1|BAA86455.1|  914|Homo sapiens KIAA1141 protein protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 485 RPRSCREHVTNPN*YTHMINHTAL*LVEFLYHIAQCKRS 369
           RP  C+E V + +  +H++ H A+   E  Y  A+CK +
Sbjct: 500 RPHKCQECVRSFSRPSHLMRHQAIHTAEKPYSCAECKET 538


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,043,405
Number of Sequences: 237096
Number of extensions: 1130384
Number of successful extensions: 1890
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1890
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)