Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30719
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    28   0.081
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    28   0.081
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.7  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.0  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 0.081
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +2

Query: 416 CGVVYHMC---ILIRVCYMLTQLSRSAPVFTVVTGYFDKII 529
           CG+ YH+C   I   VC+M+  +      FT++  Y   ++
Sbjct: 154 CGIQYHICNTVISATVCFMMLLMLEIWRRFTILNNYLTIVL 194


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 0.081
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +2

Query: 416 CGVVYHMC---ILIRVCYMLTQLSRSAPVFTVVTGYFDKII 529
           CG+ YH+C   I   VC+M+  +      FT++  Y   ++
Sbjct: 150 CGIQYHICNTVISATVCFMMLLMLEIWRRFTILNNYLTIVL 190


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +1

Query: 220 SFLEDADDAASDNTRID 270
           S++EDA++  S+NT +D
Sbjct: 2   SYIEDANETDSNNTSLD 18


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 635 PPNLVIKMGLAKYEEPPSLL 576
           PP  V+ + + KYE  PS++
Sbjct: 139 PPGNVLNLTMPKYEPNPSII 158


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 635 PPNLVIKMGLAKYEEPPSLL 576
           PP  V+ + + KYE  PS++
Sbjct: 139 PPGNVLNLTMPKYEPNPSII 158


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 522 LSKYPVTTVKTGADLESC 469
           + KY +  + +G DL SC
Sbjct: 184 IQKYAIPVILSGRDLMSC 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,037
Number of Sequences: 336
Number of extensions: 3307
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)