Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30719
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.7  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   5.1  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   8.9  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 428 KPHRTMISRVLYHIAQCKRSSRCHVQFRRASVTR*IY 318
           KP+     R L  + + KR++  H Q RR   +R IY
Sbjct: 401 KPNPPWADRTLKRLKRVKRAAYRHYQTRRCQRSRSIY 437


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -1

Query: 293 NGHKIFHTSIRVLS--DAASSASSRKLNLLDATKL 195
           NG  ++H  +R LS  D  S+    K N +D T++
Sbjct: 543 NGRVLYHPDLRPLSDNDQYSATLKHKYNSVDLTEV 577


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 376 NDRLGATYSSVVRQSLDKFTLYTLVTCRTDTKYFTRLY 263
           +DR   T SS V   L +      VT    +KY TRL+
Sbjct: 49  SDRKRLTASSAVNACLTRCAFTDAVTTVEVSKYSTRLH 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,750
Number of Sequences: 2352
Number of extensions: 13354
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)