Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30719
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040049-1|AAH40049.1|  148|Homo sapiens family with sequence si...    31   3.8  
AL121886-5|CAI18926.1|  123|Homo sapiens family with sequence si...    31   3.8  
AL121886-4|CAC08393.1|  148|Homo sapiens family with sequence si...    31   3.8  
AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix pr...    31   5.0  
AB040933-1|BAA96024.2| 2240|Homo sapiens KIAA1500 protein protein.     31   5.0  

>BC040049-1|AAH40049.1|  148|Homo sapiens family with sequence
           similarity 112, member A protein.
          Length = 148

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 443 IYTYDKPHRTMISRVLYHIAQCKRSS 366
           I  YD  HR  +SR  YH+A C+R +
Sbjct: 8   ICPYDPHHRIPLSRFQYHLASCRRKN 33


>AL121886-5|CAI18926.1|  123|Homo sapiens family with sequence
           similarity 112, member A protein.
          Length = 123

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 443 IYTYDKPHRTMISRVLYHIAQCKRSS 366
           I  YD  HR  +SR  YH+A C+R +
Sbjct: 8   ICPYDPHHRIPLSRFQYHLASCRRKN 33


>AL121886-4|CAC08393.1|  148|Homo sapiens family with sequence
           similarity 112, member A protein.
          Length = 148

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 443 IYTYDKPHRTMISRVLYHIAQCKRSS 366
           I  YD  HR  +SR  YH+A C+R +
Sbjct: 8   ICPYDPHHRIPLSRFQYHLASCRRKN 33


>AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix protein
            protein.
          Length = 4007

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -2

Query: 457  TNPN*YTHMINHTAL*LVEFYIT*HNVNDRLGATYSSVVRQSLDKFTLYTLVTCRTD 287
            + PN  +  + H    L+ F  T +NV+++ G+   SV  Q       Y +V CRT+
Sbjct: 2537 SKPNVVSDNVFHIQWSLISFKYTSYNVSEKAGSV--SVTVQRTGNLNQYAIVLCRTE 2591


>AB040933-1|BAA96024.2| 2240|Homo sapiens KIAA1500 protein protein.
          Length = 2240

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -2

Query: 457 TNPN*YTHMINHTAL*LVEFYIT*HNVNDRLGATYSSVVRQSLDKFTLYTLVTCRTD 287
           + PN  +  + H    L+ F  T +NV+++ G+   SV  Q       Y +V CRT+
Sbjct: 766 SKPNVVSDNVFHIQWSLISFKYTSYNVSEKAGSV--SVTVQRTGNLNQYAIVLCRTE 820


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,802,926
Number of Sequences: 237096
Number of extensions: 1839969
Number of successful extensions: 2544
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2544
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)