Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30719
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein.    29   4.4  
BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p pro...    29   4.4  
AY058464-1|AAL13693.1|  819|Drosophila melanogaster GH26553p pro...    29   4.4  
AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA ...    29   4.4  

>DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein.
          Length = 1873

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -2

Query: 487  GRPRKLREHVTNPN*YTHM---INHTAL*LVEFYIT*HNVNDRLGATYSSVVRQ 335
            GRP+ LRE V N   YT +   IN +A  L+E  IT H+     GA   +VVRQ
Sbjct: 1793 GRPKDLREGVANA--YTIVREGINESANTLIEAAITEHDQKGYSGAV-GAVVRQ 1843


>BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p protein.
          Length = 1906

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -2

Query: 487  GRPRKLREHVTNPN*YTHM---INHTAL*LVEFYIT*HNVNDRLGATYSSVVRQ 335
            GRP+ LRE V N   YT +   IN +A  L+E  IT H+     GA   +VVRQ
Sbjct: 1812 GRPKDLREGVANA--YTIVREGINESANTLIEAAITEHDQKGYSGAV-GAVVRQ 1862


>AY058464-1|AAL13693.1|  819|Drosophila melanogaster GH26553p
           protein.
          Length = 819

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -2

Query: 487 GRPRKLREHVTNPN*YTHM---INHTAL*LVEFYIT*HNVNDRLGATYSSVVRQ 335
           GRP+ LRE V N   YT +   IN +A  L+E  IT H+     GA   +VVRQ
Sbjct: 725 GRPKDLREGVANA--YTIVREGINESANTLIEAAITEHDQKGYSGAV-GAVVRQ 775


>AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA
            protein.
          Length = 1906

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -2

Query: 487  GRPRKLREHVTNPN*YTHM---INHTAL*LVEFYIT*HNVNDRLGATYSSVVRQ 335
            GRP+ LRE V N   YT +   IN +A  L+E  IT H+     GA   +VVRQ
Sbjct: 1812 GRPKDLREGVANA--YTIVREGINESANTLIEAAITEHDQKGYSGAV-GAVVRQ 1862


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,644,908
Number of Sequences: 53049
Number of extensions: 557479
Number of successful extensions: 1318
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)