Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30717
(729 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 144 3e-33
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 132 1e-29
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 126 4e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 120 5e-26
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 110 3e-23
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 103 6e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 102 1e-20
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 101 2e-20
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 93 6e-18
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 91 3e-17
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 89 8e-17
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 86 1e-15
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 75 2e-12
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 73 1e-11
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 72 2e-11
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 70 5e-11
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 69 9e-11
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 53 8e-06
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 51 3e-05
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 48 3e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 0.001
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 43 0.009
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 42 0.012
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.020
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.036
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.062
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 39 0.14
UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 37 0.44
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.58
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 36 1.0
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 35 2.3
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 34 4.1
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 9.5
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 144 bits (348), Expect = 3e-33
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +1
Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
F + +L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 504
GFT KDS+SQRKTCYAQH+Q++ IR KM
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKM 171
Score = 126 bits (303), Expect = 7e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = +2
Query: 53 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 232
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 233 ERSFRKF 253
ERSFRKF
Sbjct: 81 ERSFRKF 87
Score = 43.6 bits (98), Expect = 0.005
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = +3
Query: 510 IITRDVTNSELREVVNKLIPDSIAKDIREGLPWASNLWRDWFASEK*KCLKEGPRFSRSR 689
II R++T+++L+ VV KL+PDSIAKDI + L D + K K LK+ PRF S
Sbjct: 174 IIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPL-HDVYI-RKVKVLKK-PRFDLSS 230
Query: 690 NFDWELHG 713
ELHG
Sbjct: 231 LM--ELHG 236
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 132 bits (318), Expect = 1e-29
Identities = 61/90 (67%), Positives = 72/90 (80%)
Frame = +1
Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
F + +LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 510
GFT K + RKT YAQH QVR IRKKM E
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 105 bits (251), Expect = 1e-21
Identities = 48/65 (73%), Positives = 56/65 (86%)
Frame = +2
Query: 53 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 232
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 233 ERSFR 247
R F+
Sbjct: 81 FRKFK 85
Score = 47.2 bits (107), Expect = 4e-04
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +3
Query: 492 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIREGLPWASNLWRDWFASEK*KCLKEGP 671
+K+ + I+TR+V ++L+EVVNKLIPDSI KDI + L D F K K LK+ P
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPL-HDVFV-RKVKMLKK-P 221
Query: 672 RFSRSRNFDWELHG 713
+F + ELHG
Sbjct: 222 KFELGKLM--ELHG 233
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 126 bits (305), Expect = 4e-28
Identities = 59/92 (64%), Positives = 72/92 (78%)
Frame = +1
Query: 235 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 414
+ + +I+L AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 415 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 510
CI FT K +KTCYAQ +Q+R IR+KM E
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRKMRE 565
Score = 100 bits (240), Expect = 3e-20
Identities = 47/64 (73%), Positives = 55/64 (85%)
Frame = +2
Query: 59 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 238
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474
Query: 239 SFRK 250
++RK
Sbjct: 475 AYRK 478
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 120 bits (288), Expect = 5e-26
Identities = 58/97 (59%), Positives = 74/97 (76%)
Frame = +1
Query: 235 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 414
+VF +I+L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 415 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHAT 525
I FT K ++KT YA+ ++V+AIRKKM + L T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 83.8 bits (198), Expect = 4e-15
Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 4/69 (5%)
Frame = +2
Query: 56 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 223
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73
Query: 224 TDAERSFRK 250
D + FRK
Sbjct: 74 DDESQVFRK 82
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 110 bits (265), Expect = 3e-23
Identities = 56/123 (45%), Positives = 77/123 (62%)
Frame = +1
Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
F +I+L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*TS*FLTPLPRTFEKA 600
T + +KT YA +Q+RAIR+KM E + + T + + R EKA
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKA 200
Query: 601 CHG 609
G
Sbjct: 201 TQG 203
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/64 (64%), Positives = 49/64 (76%)
Frame = +2
Query: 59 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 238
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79
Query: 239 SFRK 250
+FRK
Sbjct: 80 AFRK 83
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 103 bits (246), Expect = 6e-21
Identities = 46/93 (49%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 414
K + +++L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 415 CIGFTNKDSL---SQRKTCYAQHTQVRAIRKKM 504
+ FT K S S TCYA+ +QVRAIR+K+
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKI 174
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = +2
Query: 56 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 235
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 236 RSFRK 250
+++RK
Sbjct: 82 KAWRK 86
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 102 bits (244), Expect = 1e-20
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +1
Query: 265 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 444
E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 91 EDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSN 150
Query: 445 SQRKTCYAQHTQVRAIRKKM 504
+KT YA+ Q++ IRK M
Sbjct: 151 QIKKTSYAKSAQIKKIRKIM 170
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +2
Query: 53 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 214
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 101 bits (241), Expect = 2e-20
Identities = 49/91 (53%), Positives = 63/91 (69%)
Frame = +1
Query: 238 VFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 417
+F + +L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 418 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 510
I FT K Q+ YAQ T+++ +R ++ E
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 33.9 bits (74), Expect = 4.1
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 498 ENV*IITRDVTNSELREVVNKLIPDSIAKD 587
E V ++ R+V +L+ VV KLIPDSI +D
Sbjct: 92 EIVEVVQREVARCDLKSVVQKLIPDSIGQD 121
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = +2
Query: 56 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 235
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D A
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQNDEVAF 81
Query: 236 RSFR 247
R F+
Sbjct: 82 RKFK 85
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 91.1 bits (216), Expect = 3e-17
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = +2
Query: 53 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 232
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQNDEVA 77
Query: 233 ERSFR 247
R F+
Sbjct: 78 FRKFK 82
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = +3
Query: 492 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIREGLPWASNLWRDWFASEK*KCLKEGP 671
+K+ + I+TR+V ++L+EVVNKLIPDSI KD+ + L D F K K LK+ P
Sbjct: 112 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPL-HDVFV-RKVKMLKK-P 168
Query: 672 RFSRSRNFDWELHG 713
+F + ELHG
Sbjct: 169 KFELGKLM--ELHG 180
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 393
F + +LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 89.4 bits (212), Expect = 8e-17
Identities = 40/88 (45%), Positives = 60/88 (68%)
Frame = +1
Query: 247 QIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 426
+++LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I F
Sbjct: 82 KVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAF 141
Query: 427 TNKDSLSQRKTCYAQHTQVRAIRKKMCE 510
T QRKT YAQ +Q++ IRKK+ E
Sbjct: 142 TKSIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 66.5 bits (155), Expect = 6e-10
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +2
Query: 56 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 235
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D +
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77
Query: 236 RSFRK 250
++RK
Sbjct: 78 MAWRK 82
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 85.8 bits (203), Expect = 1e-15
Identities = 33/94 (35%), Positives = 61/94 (64%)
Frame = +1
Query: 235 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 414
+ + +++ + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 415 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESL 516
+ FT + Q + CYA+ V+ +R ++ + +
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 76.6 bits (180), Expect = 6e-13
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +2
Query: 59 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 238
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 239 SFRK 250
++RK
Sbjct: 83 AYRK 86
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +1
Query: 271 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 450
++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYV 102
Query: 451 RKTCYAQHTQVRAIRKKM 504
+KTCY +H+ + IRK M
Sbjct: 103 KKTCYVKHSDEKKIRKIM 120
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +1
Query: 277 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 456
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 457 TCYAQHTQVRAIRKKMCESL 516
YA + R +R M ++L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/95 (38%), Positives = 58/95 (61%)
Frame = +1
Query: 235 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 414
K + Q QL+++ G+ L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF
Sbjct: 83 KFYLQTQLVSD---GK-CLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVF 138
Query: 415 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLH 519
I FT++ +RK C+ + +R +R + E+LH
Sbjct: 139 VIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/77 (35%), Positives = 42/77 (54%)
Frame = +2
Query: 59 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 238
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL +
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79
Query: 239 SFRKFN*SPNMCKDVMC 289
KF + D C
Sbjct: 80 GNTKFYLQTQLVSDGKC 96
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/71 (42%), Positives = 46/71 (64%)
Frame = +1
Query: 298 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 477
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 478 QVRAIRKKMCE 510
Q RA+R+++ +
Sbjct: 156 QKRALRRRITD 166
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 69.3 bits (162), Expect = 9e-11
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 238 VFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 417
V + +LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC
Sbjct: 65 VVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFC 123
Query: 418 IGF-TNKDSLSQRKTCYAQHTQVRAI 492
+G+ TN + R+ AQ+ QV I
Sbjct: 124 VGYTTNVTTRYARQLVCAQYQQVHQI 149
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 71 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFR 247
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D R F+
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVVVRKFK 70
Score = 33.1 bits (72), Expect = 7.2
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 522 DVTNSELREVVNKLIPDSIAKDIRE 596
D ++L+EV+NKL+PD++ KD+ +
Sbjct: 158 DQRRTDLKEVLNKLVPDNVGKDVEK 182
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 52.8 bits (121), Expect = 8e-06
Identities = 32/94 (34%), Positives = 53/94 (56%)
Frame = +1
Query: 271 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 450
V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G T +
Sbjct: 82 VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTA 141
Query: 451 RKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW 552
+K+ A+RKKM E+L + L+SG++
Sbjct: 142 QKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = -3
Query: 229 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNL 50
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 49 LLNTFFTALRQAFIFP 2
LL++ F L +FP
Sbjct: 136 LLSSLF-PLGNPLVFP 150
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +1
Query: 304 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 483
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S + + V
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQMQA-IREMMV 142
Query: 484 RAIRKKMCES 513
++K+ E+
Sbjct: 143 DIVKKRASET 152
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 271 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 450
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 451 RKT 459
KT
Sbjct: 137 IKT 139
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +1
Query: 310 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 489
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 490 IRKKMCESLHATS 528
IR+ M + +HA +
Sbjct: 134 IRRVMIDKVHAAA 146
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 42.3 bits (95), Expect = 0.012
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = +1
Query: 271 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 450
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 451 RKTCYAQHTQVRAIRKKM 504
T A+ +Q RAIRK+M
Sbjct: 119 --TRRAKTSQQRAIRKEM 134
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.020
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 53 IVDPFTRKDWYDVKAPSMFSKRQVGTT 133
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 40.7 bits (91), Expect = 0.036
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +1
Query: 265 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 435
E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 70 EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 37.5 bits (83), Expect = 0.33
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 56 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 223
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGD 57
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.9 bits (89), Expect = 0.062
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 148 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKVFPQIQLIAEYVQGRNVLCNFHGMDLTT 321
P N+ N GRI S R T+ H K ++ + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEH--SKHMTRMYFKVDGVSGNNATSQFVGHDTTR 95
Query: 322 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 459
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 271 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLS 447
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT + S
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRRCKTS 135
Query: 448 QRKTCYAQHTQV 483
Q++ A Q+
Sbjct: 136 QKRAIRAIMRQI 147
>UniRef50_Q30XF1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 351
Score = 38.3 bits (85), Expect = 0.19
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -2
Query: 563 QLVHHLPEFRVSDVACNDSHIFFLIALT*VCWA*HVLRWLKESLLVKPMQKT 408
+L+H + S AC D + FF+ LT + A H +RWL+E+ ++ +Q T
Sbjct: 117 RLLHRWRNGKASVTACLDDYAFFIAGLTALYEATHEVRWLREAAALQQVQDT 168
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 37.1 bits (82), Expect = 0.44
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 271 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 450
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 451 RKTCYAQHTQVRAIRKKMCES 513
+K+ + Q + +K ES
Sbjct: 130 QKSAIRKVMQ-EIVEQKARES 149
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.58
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +1
Query: 274 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 429
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 35.9 bits (79), Expect = 1.0
Identities = 28/94 (29%), Positives = 50/94 (53%)
Frame = +1
Query: 154 NENCFGRIEGKSFRSFPG*STS*H*RGKVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLR 333
+E+ GRI + + F G T H V + + ++E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFR-VSETV-GQDALTTFVGHHHQTNHIR 104
Query: 334 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 435
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +1
Query: 310 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 489
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 490 IRKKMCESLHATS 528
IR+ M + + T+
Sbjct: 134 IRRTMIDLVRETA 146
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +1
Query: 235 KVFPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 414
K++ QI ++E + F + + + LR +V++ + + +DVKT+DGYV R+
Sbjct: 65 KIYFQIDKVSE----ESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLK 120
Query: 415 CIGFTNKDSLSQRK 456
+ T + + +K
Sbjct: 121 VLALTYRHLNTSKK 134
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 308 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 433
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,690,137
Number of Sequences: 1657284
Number of extensions: 16023265
Number of successful extensions: 43604
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 41931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43591
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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