Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30717
(729 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 142 6e-34
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 142 6e-34
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 142 6e-34
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 142 6e-34
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 137 2e-32
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 109 5e-24
BT029116-1|ABJ17049.1| 702|Drosophila melanogaster IP15292p pro... 29 4.9
AE014297-3425|AAS65202.1| 909|Drosophila melanogaster CG31140-P... 29 4.9
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 142 bits (343), Expect = 6e-34
Identities = 66/90 (73%), Positives = 74/90 (82%)
Frame = +1
Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 510
GFT KD SQRKTCYAQ +QVR IR +M +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTD 173
Score = 116 bits (279), Expect = 3e-26
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +2
Query: 53 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 232
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 233 ERSFRKF 253
ERSFRKF
Sbjct: 81 ERSFRKF 87
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 142 bits (343), Expect = 6e-34
Identities = 66/90 (73%), Positives = 74/90 (82%)
Frame = +1
Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 510
GFT KD SQRKTCYAQ +QVR IR +M +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTD 173
Score = 116 bits (279), Expect = 3e-26
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +2
Query: 53 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 232
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 233 ERSFRKF 253
ERSFRKF
Sbjct: 81 ERSFRKF 87
Score = 40.3 bits (90), Expect = 0.003
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +3
Query: 510 IITRDVTNSELREVVNKLIPDSIAKDIREGLPWASNLWRDWFASEK*KCLKEGPRFSRSR 689
IIT +V+ ++L+++VNKL DSIAKDI + L D + K K LK+ PRF S+
Sbjct: 174 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL-HDVYI-RKVKVLKK-PRFDVSK 230
Query: 690 NFDWELHG 713
ELHG
Sbjct: 231 LL--ELHG 236
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 142 bits (343), Expect = 6e-34
Identities = 66/90 (73%), Positives = 74/90 (82%)
Frame = +1
Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 34 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 93
Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 510
GFT KD SQRKTCYAQ +QVR IR +M +
Sbjct: 94 GFTAKDQQSQRKTCYAQQSQVRKIRARMTD 123
Score = 45.2 bits (102), Expect = 9e-05
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +2
Query: 182 GRVFEVSLADLQADTDAERSFRKF 253
GRVFEVSLADLQ D D ERSFRKF
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKF 37
Score = 40.3 bits (90), Expect = 0.003
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +3
Query: 510 IITRDVTNSELREVVNKLIPDSIAKDIREGLPWASNLWRDWFASEK*KCLKEGPRFSRSR 689
IIT +V+ ++L+++VNKL DSIAKDI + L D + K K LK+ PRF S+
Sbjct: 124 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL-HDVYI-RKVKVLKK-PRFDVSK 180
Query: 690 NFDWELHG 713
ELHG
Sbjct: 181 LL--ELHG 186
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 142 bits (343), Expect = 6e-34
Identities = 66/90 (73%), Positives = 74/90 (82%)
Frame = +1
Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 84 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 143
Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 510
GFT KD SQRKTCYAQ +QVR IR +M +
Sbjct: 144 GFTAKDQQSQRKTCYAQQSQVRKIRARMTD 173
Score = 116 bits (279), Expect = 3e-26
Identities = 53/67 (79%), Positives = 59/67 (88%)
Frame = +2
Query: 53 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 232
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 233 ERSFRKF 253
ERSFRKF
Sbjct: 81 ERSFRKF 87
Score = 40.3 bits (90), Expect = 0.003
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +3
Query: 510 IITRDVTNSELREVVNKLIPDSIAKDIREGLPWASNLWRDWFASEK*KCLKEGPRFSRSR 689
IIT +V+ ++L+++VNKL DSIAKDI + L D + K K LK+ PRF S+
Sbjct: 174 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL-HDVYI-RKVKVLKK-PRFDVSK 230
Query: 690 NFDWELHG 713
ELHG
Sbjct: 231 LL--ELHG 236
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 137 bits (331), Expect = 2e-32
Identities = 64/85 (75%), Positives = 70/85 (82%)
Frame = +1
Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
F + +LIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCI
Sbjct: 85 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 144
Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIR 495
GFT KD SQRKTCYA +QVR IR
Sbjct: 145 GFTAKDQQSQRKTCYAHESQVRKIR 169
Score = 106 bits (255), Expect = 3e-23
Identities = 50/68 (73%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Frame = +2
Query: 53 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTD 229
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80
Query: 230 AERSFRKF 253
E SFRKF
Sbjct: 81 PEHSFRKF 88
Score = 40.3 bits (90), Expect = 0.003
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +3
Query: 510 IITRDVTNSELREVVNKLIPDSIAKDIREGLPWASNLWRDWFASEK*KCLKEGPRFSRSR 689
IIT +V+ ++L+++VNKL DSIAKDI + L D + K K LK+ PRF S+
Sbjct: 176 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL-HDVYI-RKVKVLKK-PRFDVSK 232
Query: 690 NFDWELHG 713
ELHG
Sbjct: 233 LL--ELHG 238
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 109 bits (261), Expect = 5e-24
Identities = 50/68 (73%), Positives = 56/68 (82%)
Frame = +1
Query: 307 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 486
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 487 AIRKKMCE 510
IR +M +
Sbjct: 61 KIRARMTD 68
Score = 40.3 bits (90), Expect = 0.003
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +3
Query: 510 IITRDVTNSELREVVNKLIPDSIAKDIREGLPWASNLWRDWFASEK*KCLKEGPRFSRSR 689
IIT +V+ ++L+++VNKL DSIAKDI + L D + K K LK+ PRF S+
Sbjct: 69 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPL-HDVYI-RKVKVLKK-PRFDVSK 125
Query: 690 NFDWELHG 713
ELHG
Sbjct: 126 LL--ELHG 131
>BT029116-1|ABJ17049.1| 702|Drosophila melanogaster IP15292p
protein.
Length = 702
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -1
Query: 702 PNQNFEISKNGGLLSNTFTFRMQTNR----ARG*MPMAGLLECPWQWSQESTCSPPP 544
P Q F++ NGG L + FR TN G + +L+C Q+S CS PP
Sbjct: 313 PYQVFDLD-NGGPLPGLYVFRQITNYKILVCGGDGTIGWVLQCLDNVGQDSECSSPP 368
>AE014297-3425|AAS65202.1| 909|Drosophila melanogaster CG31140-PC,
isoform C protein.
Length = 909
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -1
Query: 702 PNQNFEISKNGGLLSNTFTFRMQTNR----ARG*MPMAGLLECPWQWSQESTCSPPP 544
P Q F++ NGG L + FR TN G + +L+C Q+S CS PP
Sbjct: 543 PYQVFDLD-NGGPLPGLYVFRQITNYKILVCGGDGTIGWVLQCLDNVGQDSECSSPP 598
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,798,690
Number of Sequences: 53049
Number of extensions: 761627
Number of successful extensions: 2154
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2153
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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