Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30717
         (729 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   105   3e-23
Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cycl...    29   2.6  
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AC006790-1|AAY55890.1|  309|Caenorhabditis elegans Hypothetical ...    28   7.9  
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.      28   7.9  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  105 bits (252), Expect = 3e-23
 Identities = 49/66 (74%), Positives = 57/66 (86%)
 Frame = +2

Query: 56  VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 235
           VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL    ++E
Sbjct: 20  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76

Query: 236 RSFRKF 253
             FRKF
Sbjct: 77  ADFRKF 82



 Score =  104 bits (250), Expect = 6e-23
 Identities = 51/88 (57%), Positives = 62/88 (70%)
 Frame = +1

Query: 241 FPQIQLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 420
           F + +LIAE VQG+NVL NFH M +T DKL  +VKKW TLIEAN  VKTTDGY LRVF I
Sbjct: 79  FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVI 138

Query: 421 GFTNKDSLSQRKTCYAQHTQVRAIRKKM 504
            FT K     +KT Y + +++R IR +M
Sbjct: 139 AFTKKSVNQVKKTSYTKTSKIRKIRSEM 166



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = +3

Query: 492 QKENV*IITRDVTNSELREVVNKLIPDSIAKDIRE 596
           + E +  I ++VT  +L+EVV+KLIPDSI KDI +
Sbjct: 163 RSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEK 197


>Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical
           protein R01E6.1 protein.
          Length = 1014

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/50 (28%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = +3

Query: 459 VLRPAHSGQSNQKENV*IITRDVTNSELR--EVVNKLIPDSIAKDIREGL 602
           ++R +       ++ V I T D+ +++++   ++N+++P SIAKD++ GL
Sbjct: 767 MIRMSEKYADELEQMVAIRTADLADAQMQTMRLLNEMLPASIAKDLKNGL 816


>AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1017

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/50 (28%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = +3

Query: 459 VLRPAHSGQSNQKENV*IITRDVTNSELR--EVVNKLIPDSIAKDIREGL 602
           ++R +       ++ V I T D+ +++++   ++N+++P SIAKD++ GL
Sbjct: 770 MIRMSEKYADELEQMVAIRTADLADAQMQTMRLLNEMLPASIAKDLKNGL 819


>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 418  IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*T 558
            IGF  ++ L   + C   + Q R   ++ C S  + S+    G W T
Sbjct: 868  IGFQIRERLCDGELCATANKQARTCNQQQCPSAFSLSVWSEWGEWTT 914


>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 418  IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*T 558
            IGF  ++ L   + C   + Q R   ++ C S  + S+    G W T
Sbjct: 868  IGFQIRERLCDGELCATANKQARTCNQQQCPSAFSLSVWSEWGEWTT 914


>AC006790-1|AAY55890.1|  309|Caenorhabditis elegans Hypothetical
           protein Y49F6B.13 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = -3

Query: 667 PSFKHFHFSDANQSRQRLDAHGRPSRMSLAMESGINLFTTSLSSELVT 524
           P F+  HF + N++   L    RP+R+   +++GI +    + +  +T
Sbjct: 243 PGFREGHFVNGNRNEVSLSLIFRPTRVEYPIKTGIFVLEHGVETHPIT 290


>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 418  IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCESLHATSLTLNSGRW*T 558
            IGF  ++ L   + C   + Q R   ++ C S  + S+    G W T
Sbjct: 868  IGFQIRERLCDGELCATANKQARTCNQQQCPSAFSLSVWSEWGEWTT 914


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,553,492
Number of Sequences: 27780
Number of extensions: 381594
Number of successful extensions: 1090
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)